These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

151 related articles for article (PubMed ID: 19188190)

  • 21. Generating realistic in silico gene networks for performance assessment of reverse engineering methods.
    Marbach D; Schaffter T; Mattiussi C; Floreano D
    J Comput Biol; 2009 Feb; 16(2):229-39. PubMed ID: 19183003
    [TBL] [Abstract][Full Text] [Related]  

  • 22. RRDB: a comprehensive and non-redundant benchmark for RNA-RNA docking and scoring.
    Yan Y; Huang SY
    Bioinformatics; 2018 Feb; 34(3):453-458. PubMed ID: 29028888
    [TBL] [Abstract][Full Text] [Related]  

  • 23. SiPAN: simultaneous prediction and alignment of protein-protein interaction networks.
    Alkan F; Erten C
    Bioinformatics; 2015 Jul; 31(14):2356-63. PubMed ID: 25788620
    [TBL] [Abstract][Full Text] [Related]  

  • 24. A benchmark-driven approach to reconstruct metabolic networks for studying cancer metabolism.
    Jamialahmadi O; Hashemi-Najafabadi S; Motamedian E; Romeo S; Bagheri F
    PLoS Comput Biol; 2019 Apr; 15(4):e1006936. PubMed ID: 31009458
    [TBL] [Abstract][Full Text] [Related]  

  • 25. Reconstructing directed signed gene regulatory network from microarray data.
    Qiu P; Plevritis SK
    IEEE Trans Biomed Eng; 2011 Dec; 58(12):3518-21. PubMed ID: 21803675
    [TBL] [Abstract][Full Text] [Related]  

  • 26. Biological Network Inference from Microarray Data, Current Solutions, and Assessments.
    Roy S; Guzzi PH
    Methods Mol Biol; 2016; 1375():155-67. PubMed ID: 26507508
    [TBL] [Abstract][Full Text] [Related]  

  • 27. Modified Half-System Based Method for Reverse Engineering of Gene Regulatory Networks.
    Khan A; Saha G; Pal RK
    IEEE/ACM Trans Comput Biol Bioinform; 2020; 17(4):1303-1316. PubMed ID: 30640623
    [TBL] [Abstract][Full Text] [Related]  

  • 28. Benchmarking selected computational gene network growing tools in context of virus-host interactions.
    Taye B; Vaz C; Tanavde V; Kuznetsov VA; Eisenhaber F; Sugrue RJ; Maurer-Stroh S
    Sci Rep; 2017 Jul; 7(1):5805. PubMed ID: 28724991
    [TBL] [Abstract][Full Text] [Related]  

  • 29. Gene regulation network inference using k-nearest neighbor-based mutual information estimation: revisiting an old DREAM.
    Shachaf LI; Roberts E; Cahan P; Xiao J
    BMC Bioinformatics; 2023 Mar; 24(1):84. PubMed ID: 36879188
    [TBL] [Abstract][Full Text] [Related]  

  • 30. A novel probabilistic generator for large-scale gene association networks.
    Grimes T; Datta S
    PLoS One; 2021; 16(11):e0259193. PubMed ID: 34767561
    [TBL] [Abstract][Full Text] [Related]  

  • 31. Revealing strengths and weaknesses of methods for gene network inference.
    Marbach D; Prill RJ; Schaffter T; Mattiussi C; Floreano D; Stolovitzky G
    Proc Natl Acad Sci U S A; 2010 Apr; 107(14):6286-91. PubMed ID: 20308593
    [TBL] [Abstract][Full Text] [Related]  

  • 32. Benchmarking network-based gene prioritization methods for cerebral small vessel disease.
    Zhang H; Ferguson A; Robertson G; Jiang M; Zhang T; Sudlow C; Smith K; Rannikmae K; Wu H
    Brief Bioinform; 2021 Sep; 22(5):. PubMed ID: 33634312
    [TBL] [Abstract][Full Text] [Related]  

  • 33. An automated benchmarking platform for MHC class II binding prediction methods.
    Andreatta M; Trolle T; Yan Z; Greenbaum JA; Peters B; Nielsen M
    Bioinformatics; 2018 May; 34(9):1522-1528. PubMed ID: 29281002
    [TBL] [Abstract][Full Text] [Related]  

  • 34. An improved Bayesian network method for reconstructing gene regulatory network based on candidate auto selection.
    Xing L; Guo M; Liu X; Wang C; Wang L; Zhang Y
    BMC Genomics; 2017 Nov; 18(Suppl 9):844. PubMed ID: 29219084
    [TBL] [Abstract][Full Text] [Related]  

  • 35. Reconstructing transcriptional regulatory networks using three-way mutual information and Bayesian networks.
    Luo W; Woolf PJ
    Methods Mol Biol; 2010; 674():401-18. PubMed ID: 20827604
    [TBL] [Abstract][Full Text] [Related]  

  • 36. A new asynchronous parallel algorithm for inferring large-scale gene regulatory networks.
    Xiao X; Zhang W; Zou X
    PLoS One; 2015; 10(3):e0119294. PubMed ID: 25807392
    [TBL] [Abstract][Full Text] [Related]  

  • 37. Gene regulatory networks modelling using a dynamic evolutionary hybrid.
    Maraziotis IA; Dragomir A; Thanos D
    BMC Bioinformatics; 2010 Mar; 11():140. PubMed ID: 20298548
    [TBL] [Abstract][Full Text] [Related]  

  • 38. A sparse and decomposed particle swarm optimization for inferring gene regulatory networks based on fuzzy cognitive maps.
    Liu L; Liu J
    J Bioinform Comput Biol; 2019 Aug; 17(4):1950023. PubMed ID: 31617458
    [TBL] [Abstract][Full Text] [Related]  

  • 39. Benchmarking causal reasoning algorithms for gene expression-based compound mechanism of action analysis.
    Hosseini-Gerami L; Higgins IA; Collier DA; Laing E; Evans D; Broughton H; Bender A
    BMC Bioinformatics; 2023 Apr; 24(1):154. PubMed ID: 37072707
    [TBL] [Abstract][Full Text] [Related]  

  • 40. Structural systems identification of genetic regulatory networks.
    Xiong H; Choe Y
    Bioinformatics; 2008 Feb; 24(4):553-60. PubMed ID: 18175769
    [TBL] [Abstract][Full Text] [Related]  

    [Previous]   [Next]    [New Search]
    of 8.