These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.
109 related articles for article (PubMed ID: 19205025)
41. Cataloging topologies of protein folding patterns. Konagurthu AS; Lesk AM J Mol Recognit; 2010; 23(2):253-7. PubMed ID: 20151416 [TBL] [Abstract][Full Text] [Related]
42. A novel approach to segregate and identify functional loop regions in protein structures using their Ramachandran maps. Kumar MV; Swaminathan R Proteins; 2010 Mar; 78(4):900-16. PubMed ID: 19899172 [TBL] [Abstract][Full Text] [Related]
45. SABA (secondary structure assignment program based on only alpha carbons): a novel pseudo center geometrical criterion for accurate assignment of protein secondary structures. Park SY; Yoo MJ; Shin J; Cho KH BMB Rep; 2011 Feb; 44(2):118-22. PubMed ID: 21345311 [TBL] [Abstract][Full Text] [Related]
46. Up, down, and around: identifying recurrent interactions within and between super-secondary structures in β-propellers. Thirup S; Gupta V; Quistgaard EM Methods Mol Biol; 2013; 932():35-50. PubMed ID: 22987345 [TBL] [Abstract][Full Text] [Related]
47. Protein secondary structure classification revisited: processing DSSP information with PSSC. Zacharias J; Knapp EW J Chem Inf Model; 2014 Jul; 54(7):2166-79. PubMed ID: 24866861 [TBL] [Abstract][Full Text] [Related]
48. Comparing protein contact maps via Universal Similarity Metric: an improvement in the noise-tolerance. Rahmati S; Glasgow JI Int J Comput Biol Drug Des; 2009; 2(2):149-67. PubMed ID: 20090168 [TBL] [Abstract][Full Text] [Related]
49. Structure description and identification using the tableau representation of protein folding patterns. Konagurthu AS; Lesk AM Methods Mol Biol; 2013; 932():51-9. PubMed ID: 22987346 [TBL] [Abstract][Full Text] [Related]
51. Geometric parameters defining the structure of proteins--relation to early-stage folding step. Jurkowski W; Kułaga T; Roterman I J Biomol Struct Dyn; 2011 Aug; 29(1):79-104. PubMed ID: 21696227 [TBL] [Abstract][Full Text] [Related]
52. A protein structural class prediction method based on novel features. Zhang L; Zhao X; Kong L Biochimie; 2013 Sep; 95(9):1741-4. PubMed ID: 23770446 [TBL] [Abstract][Full Text] [Related]
53. A novel method for comparing topological models of protein structures enhanced with ligand information. Veeramalai M; Gilbert D Bioinformatics; 2008 Dec; 24(23):2698-705. PubMed ID: 18842602 [TBL] [Abstract][Full Text] [Related]
54. Quaternion-based definition of protein secondary structure straightness and its relationship to Ramachandran angles. Hanson RM; Kohler D; Braun SG Proteins; 2011 Jul; 79(7):2172-80. PubMed ID: 21557319 [TBL] [Abstract][Full Text] [Related]
55. Structural search and retrieval using a tableau representation of protein folding patterns. Konagurthu AS; Stuckey PJ; Lesk AM Bioinformatics; 2008 Mar; 24(5):645-51. PubMed ID: 18175768 [TBL] [Abstract][Full Text] [Related]
56. ScrewFit: combining localization and description of protein secondary structure. Calligari PA; Kneller GR Acta Crystallogr D Biol Crystallogr; 2012 Dec; 68(Pt 12):1690-3. PubMed ID: 23151634 [TBL] [Abstract][Full Text] [Related]
57. Efficient identification and analysis of substructures in proteins using the kappa-tau framework: left turns and helix c-cap motifs. Soumpasis DM; Strahm MC J Biomol Struct Dyn; 2000 Jun; 17(6):965-79. PubMed ID: 10949164 [TBL] [Abstract][Full Text] [Related]
58. PALSSE: a program to delineate linear secondary structural elements from protein structures. Majumdar I; Krishna SS; Grishin NV BMC Bioinformatics; 2005 Aug; 6():202. PubMed ID: 16095538 [TBL] [Abstract][Full Text] [Related]
59. RENNSH: a novel α-helix identification approach for intermediate resolution electron density maps. Ma L; Reisert M; Burkhardt H IEEE/ACM Trans Comput Biol Bioinform; 2012; 9(1):228-39. PubMed ID: 21383418 [TBL] [Abstract][Full Text] [Related]
60. On Representing Protein Folding Patterns Using Non-Linear Parametric Curves. Kasarapu P; de la Banda MG; Konagurthu AS IEEE/ACM Trans Comput Biol Bioinform; 2014; 11(6):1218-28. PubMed ID: 26357057 [TBL] [Abstract][Full Text] [Related] [Previous] [Next] [New Search]