151 related articles for article (PubMed ID: 19208138)
1. Fine-grained parallel RNAalifold algorithm for RNA secondary structure prediction on FPGA.
Xia F; Dou Y; Zhou X; Yang X; Xu J; Zhang Y
BMC Bioinformatics; 2009 Jan; 10 Suppl 1(Suppl 1):S37. PubMed ID: 19208138
[TBL] [Abstract][Full Text] [Related]
2. FPGA accelerator for protein secondary structure prediction based on the GOR algorithm.
Xia F; Dou Y; Lei G; Tan Y
BMC Bioinformatics; 2011 Feb; 12 Suppl 1(Suppl 1):S5. PubMed ID: 21342582
[TBL] [Abstract][Full Text] [Related]
3. Fine-grained parallelism accelerating for RNA secondary structure prediction with pseudoknots based on FPGA.
Xia F; Jin G
J Bioinform Comput Biol; 2014 Jun; 12(3):1450008. PubMed ID: 24969746
[TBL] [Abstract][Full Text] [Related]
4. CPU-GPU hybrid accelerating the Zuker algorithm for RNA secondary structure prediction applications.
Lei G; Dou Y; Wan W; Xia F; Li R; Ma M; Zou D
BMC Genomics; 2012; 13 Suppl 1(Suppl 1):S14. PubMed ID: 22369626
[TBL] [Abstract][Full Text] [Related]
5. RNAalifold: improved consensus structure prediction for RNA alignments.
Bernhart SH; Hofacker IL; Will S; Gruber AR; Stadler PF
BMC Bioinformatics; 2008 Nov; 9():474. PubMed ID: 19014431
[TBL] [Abstract][Full Text] [Related]
6. FPGASW: Accelerating Large-Scale Smith-Waterman Sequence Alignment Application with Backtracking on FPGA Linear Systolic Array.
Fei X; Dan Z; Lina L; Xin M; Chunlei Z
Interdiscip Sci; 2018 Mar; 10(1):176-188. PubMed ID: 28432608
[TBL] [Abstract][Full Text] [Related]
7. Extending the BEAGLE library to a multi-FPGA platform.
Jin Z; Bakos JD
BMC Bioinformatics; 2013 Jan; 14():25. PubMed ID: 23331707
[TBL] [Abstract][Full Text] [Related]
8. Incorporating phylogenetic-based covarying mutations into RNAalifold for RNA consensus structure prediction.
Ge P; Zhang S
BMC Bioinformatics; 2013 Apr; 14():142. PubMed ID: 23621982
[TBL] [Abstract][Full Text] [Related]
9. Designing Deep Learning Hardware Accelerator and Efficiency Evaluation.
Qi Z; Chen W; Naqvi RA; Siddique K
Comput Intell Neurosci; 2022; 2022():1291103. PubMed ID: 35875766
[TBL] [Abstract][Full Text] [Related]
10. Energy-based RNA consensus secondary structure prediction in multiple sequence alignments.
Washietl S; Bernhart SH; Kellis M
Methods Mol Biol; 2014; 1097():125-41. PubMed ID: 24639158
[TBL] [Abstract][Full Text] [Related]
11. FPGA-based hardware accelerator for SENSE (a parallel MR image reconstruction method).
Inam O; Basit A; Qureshi M; Omer H
Comput Biol Med; 2020 Feb; 117():103598. PubMed ID: 32072979
[TBL] [Abstract][Full Text] [Related]
12. RNA secondary structure prediction using highly parallel computers.
Nakaya A; Yamamoto K; Yonezawa A
Comput Appl Biosci; 1995 Dec; 11(6):685-92. PubMed ID: 8808586
[TBL] [Abstract][Full Text] [Related]
13. RNA consensus structure prediction with RNAalifold.
Hofacker IL
Methods Mol Biol; 2007; 395():527-44. PubMed ID: 17993696
[TBL] [Abstract][Full Text] [Related]
14. Runtime Programmable and Memory Bandwidth Optimized FPGA-Based Coprocessor for Deep Convolutional Neural Network.
Shah N; Chaudhari P; Varghese K
IEEE Trans Neural Netw Learn Syst; 2018 Dec; 29(12):5922-5934. PubMed ID: 29993989
[TBL] [Abstract][Full Text] [Related]
15. Fully Parallel Implementation of Otsu Automatic Image Thresholding Algorithm on FPGA.
Barros WKP; Dias LA; Fernandes MAC
Sensors (Basel); 2021 Jun; 21(12):. PubMed ID: 34204291
[TBL] [Abstract][Full Text] [Related]
16. Predicting RNA structure using mutual information.
Freyhult E; Moulton V; Gardner P
Appl Bioinformatics; 2005; 4(1):53-9. PubMed ID: 16000013
[TBL] [Abstract][Full Text] [Related]
17. X-Ray Tomography Reconstruction Accelerated on FPGA Through High-Level Synthesis Tools.
Diakite D; Gac N
IEEE Trans Biomed Circuits Syst; 2023 Apr; 17(2):375-389. PubMed ID: 37030851
[TBL] [Abstract][Full Text] [Related]
18. Real-time prediction of neuronal population spiking activity using FPGA.
Li WX; Cheung RC; Chan RH; Song D; Berger TW
IEEE Trans Biomed Circuits Syst; 2013 Aug; 7(4):489-98. PubMed ID: 23893208
[TBL] [Abstract][Full Text] [Related]
19. Parallel Optimisation and Implementation of a Real-Time Back Projection (BP) Algorithm for SAR Based on FPGA.
Cao Y; Guo S; Jiang S; Zhou X; Wang X; Luo Y; Yu Z; Zhang Z; Deng Y
Sensors (Basel); 2022 Mar; 22(6):. PubMed ID: 35336463
[TBL] [Abstract][Full Text] [Related]
20. GPU-based acceleration of an RNA tertiary structure prediction algorithm.
Jeon Y; Jung E; Min H; Chung EY; Yoon S
Comput Biol Med; 2013 Sep; 43(8):1011-22. PubMed ID: 23816173
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]