38 related articles for article (PubMed ID: 19222389)
1. Rooting a phylogenetic tree with nonreversible substitution models.
Yap VB; Speed T
BMC Evol Biol; 2005 Jan; 5():2. PubMed ID: 15629063
[TBL] [Abstract][Full Text] [Related]
2. Maximum likelihood estimation and natural pairwise estimating equations are identical for three sequences and a symmetric 2-state substitution model.
Hobolth A; Wiuf C
Theor Popul Biol; 2024 Apr; 156():1-4. PubMed ID: 38184209
[TBL] [Abstract][Full Text] [Related]
3. Toward a semi-supervised learning approach to phylogenetic estimation.
Silvestro D; Latrille T; Salamin N
Syst Biol; 2024 Jun; ():. PubMed ID: 38916476
[TBL] [Abstract][Full Text] [Related]
4. Uniform Accuracy of the Maximum Likelihood Estimates for Probabilistic Models of Biological Sequences.
Ekisheva S; Borodovsky M
Methodol Comput Appl Probab; 2011 Mar; 13(1):105-120. PubMed ID: 21318122
[TBL] [Abstract][Full Text] [Related]
5. Molecular epidemiology of human respiratory syncytial virus among children in Japan during three seasons and hospitalization risk of genotype ON1.
Hibino A; Saito R; Taniguchi K; Zaraket H; Shobugawa Y; Matsui T; Suzuki H;
PLoS One; 2018; 13(1):e0192085. PubMed ID: 29377949
[TBL] [Abstract][Full Text] [Related]
6. Composite likelihood modeling of neighboring site correlations of DNA sequence substitution rates.
Deng L; Moore DF
Stat Appl Genet Mol Biol; 2009; 8():Article 6. PubMed ID: 19222389
[TBL] [Abstract][Full Text] [Related]
7. Exploring among-site rate variation models in a maximum likelihood framework using empirical data: effects of model assumptions on estimates of topology, branch lengths, and bootstrap support.
Buckley TR; Simon C; Chambers GK
Syst Biol; 2001 Feb; 50(1):67-86. PubMed ID: 12116595
[TBL] [Abstract][Full Text] [Related]
8. A space-time process model for the evolution of DNA sequences.
Yang Z
Genetics; 1995 Feb; 139(2):993-1005. PubMed ID: 7713447
[TBL] [Abstract][Full Text] [Related]
9. Phylogenetic estimation of context-dependent substitution rates by maximum likelihood.
Siepel A; Haussler D
Mol Biol Evol; 2004 Mar; 21(3):468-88. PubMed ID: 14660683
[TBL] [Abstract][Full Text] [Related]
10. The effects of nucleotide substitution model assumptions on estimates of nonparametric bootstrap support.
Buckley TR; Cunningham CW
Mol Biol Evol; 2002 Apr; 19(4):394-405. PubMed ID: 11919280
[TBL] [Abstract][Full Text] [Related]
11. Relating physicochemical properties of amino acids to variable nucleotide substitution patterns among sites.
Yang Z
Pac Symp Biocomput; 2000; ():81-92. PubMed ID: 10902158
[TBL] [Abstract][Full Text] [Related]
12. CONFIDENCE LIMITS ON PHYLOGENIES: AN APPROACH USING THE BOOTSTRAP.
Felsenstein J
Evolution; 1985 Jul; 39(4):783-791. PubMed ID: 28561359
[TBL] [Abstract][Full Text] [Related]
13. MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) software version 4.0.
Tamura K; Dudley J; Nei M; Kumar S
Mol Biol Evol; 2007 Aug; 24(8):1596-9. PubMed ID: 17488738
[TBL] [Abstract][Full Text] [Related]
14.
; ; . PubMed ID:
[No Abstract] [Full Text] [Related]
15.
; ; . PubMed ID:
[No Abstract] [Full Text] [Related]
16.
; ; . PubMed ID:
[No Abstract] [Full Text] [Related]
17.
; ; . PubMed ID:
[No Abstract] [Full Text] [Related]
18.
; ; . PubMed ID:
[No Abstract] [Full Text] [Related]
19.
; ; . PubMed ID:
[No Abstract] [Full Text] [Related]
20.
; ; . PubMed ID:
[No Abstract] [Full Text] [Related]
[Next] [New Search]
