These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

133 related articles for article (PubMed ID: 19269988)

  • 61. GenomeCons: a web server for manipulating multiple genome sequence alignments and their consensus sequences.
    Sato T; Suyama M
    Bioinformatics; 2015 Apr; 31(8):1293-5. PubMed ID: 25480378
    [TBL] [Abstract][Full Text] [Related]  

  • 62. LOLAweb: a containerized web server for interactive genomic locus overlap enrichment analysis.
    Nagraj VP; Magee NE; Sheffield NC
    Nucleic Acids Res; 2018 Jul; 46(W1):W194-W199. PubMed ID: 29878235
    [TBL] [Abstract][Full Text] [Related]  

  • 63. Using the RNAstructure Software Package to Predict Conserved RNA Structures.
    Mathews DH
    Curr Protoc Bioinformatics; 2014 Jun; 46():12.4.1-12.4.22. PubMed ID: 24939126
    [TBL] [Abstract][Full Text] [Related]  

  • 64. pknotsRG: RNA pseudoknot folding including near-optimal structures and sliding windows.
    Reeder J; Steffen P; Giegerich R
    Nucleic Acids Res; 2007 Jul; 35(Web Server issue):W320-4. PubMed ID: 17478505
    [TBL] [Abstract][Full Text] [Related]  

  • 65. RNA-Seq read alignments with PALMapper.
    Jean G; Kahles A; Sreedharan VT; De Bona F; Rätsch G
    Curr Protoc Bioinformatics; 2010 Dec; Chapter 11():Unit 11.6. PubMed ID: 21154708
    [TBL] [Abstract][Full Text] [Related]  

  • 66. SHAPEwarp-web: sequence-agnostic search for structurally homologous RNA regions across databases of chemical probing data.
    Scholten NR; Haandrikman D; Tolhuis JO; Morandi E; Incarnato D
    Nucleic Acids Res; 2024 Jul; 52(W1):W362-W367. PubMed ID: 38709889
    [TBL] [Abstract][Full Text] [Related]  

  • 67. RASS: a web server for RNA alignment in the joint sequence-structure space.
    He G; Steppi A; Laborde J; Srivastava A; Zhao P; Zhang J
    Nucleic Acids Res; 2014 Jul; 42(Web Server issue):W377-81. PubMed ID: 24831547
    [TBL] [Abstract][Full Text] [Related]  

  • 68. Predicting RNA structure using mutual information.
    Freyhult E; Moulton V; Gardner P
    Appl Bioinformatics; 2005; 4(1):53-9. PubMed ID: 16000013
    [TBL] [Abstract][Full Text] [Related]  

  • 69. jpHMM: recombination analysis in viruses with circular genomes such as the hepatitis B virus.
    Schultz AK; Bulla I; Abdou-Chekaraou M; Gordien E; Morgenstern B; Zoaulim F; Dény P; Stanke M
    Nucleic Acids Res; 2012 Jul; 40(Web Server issue):W193-8. PubMed ID: 22600739
    [TBL] [Abstract][Full Text] [Related]  

  • 70. RNAstructure: Web servers for RNA secondary structure prediction and analysis.
    Bellaousov S; Reuter JS; Seetin MG; Mathews DH
    Nucleic Acids Res; 2013 Jul; 41(Web Server issue):W471-4. PubMed ID: 23620284
    [TBL] [Abstract][Full Text] [Related]  

  • 71. Pair stochastic tree adjoining grammars for aligning and predicting pseudoknot RNA structures.
    Matsui H; Sato K; Sakakibara Y
    Bioinformatics; 2005 Jun; 21(11):2611-7. PubMed ID: 15784748
    [TBL] [Abstract][Full Text] [Related]  

  • 72. PSAT: a web tool to compare genomic neighborhoods of multiple prokaryotic genomes.
    Fong C; Rohmer L; Radey M; Wasnick M; Brittnacher MJ
    BMC Bioinformatics; 2008 Mar; 9():170. PubMed ID: 18366802
    [TBL] [Abstract][Full Text] [Related]  

  • 73. RagPools: RNA-As-Graph-Pools--a web server for assisting the design of structured RNA pools for in vitro selection.
    Kim N; Shin JS; Elmetwaly S; Gan HH; Schlick T
    Bioinformatics; 2007 Nov; 23(21):2959-60. PubMed ID: 17855416
    [TBL] [Abstract][Full Text] [Related]  

  • 74. PLAST-ncRNA: Partition function Local Alignment Search Tool for non-coding RNA sequences.
    Chikkagoudar S; Livesay DR; Roshan U
    Nucleic Acids Res; 2010 Jul; 38(Web Server issue):W59-63. PubMed ID: 20522510
    [TBL] [Abstract][Full Text] [Related]  

  • 75. GeneMark: web software for gene finding in prokaryotes, eukaryotes and viruses.
    Besemer J; Borodovsky M
    Nucleic Acids Res; 2005 Jul; 33(Web Server issue):W451-4. PubMed ID: 15980510
    [TBL] [Abstract][Full Text] [Related]  

  • 76. RNALOSS: a web server for RNA locally optimal secondary structures.
    Clote P
    Nucleic Acids Res; 2005 Jul; 33(Web Server issue):W600-4. PubMed ID: 15980545
    [TBL] [Abstract][Full Text] [Related]  

  • 77. TFBScluster web server for the identification of mammalian composite regulatory elements.
    Donaldson IJ; Göttgens B
    Nucleic Acids Res; 2006 Jul; 34(Web Server issue):W524-8. PubMed ID: 16845063
    [TBL] [Abstract][Full Text] [Related]  

  • 78. Foldalign 2.5: multithreaded implementation for pairwise structural RNA alignment.
    Sundfeld D; Havgaard JH; de Melo AC; Gorodkin J
    Bioinformatics; 2016 Apr; 32(8):1238-40. PubMed ID: 26704597
    [TBL] [Abstract][Full Text] [Related]  

  • 79. GeNemo: a search engine for web-based functional genomic data.
    Zhang Y; Cao X; Zhong S
    Nucleic Acids Res; 2016 Jul; 44(W1):W122-7. PubMed ID: 27098038
    [TBL] [Abstract][Full Text] [Related]  

  • 80. MICAS: a fully automated web server for microsatellite extraction and analysis from prokaryote and viral genomic sequences.
    Sreenu VB; Ranjitkumar G; Swaminathan S; Priya S; Bose B; Pavan MN; Thanu G; Nagaraju J; Nagarajaram HA
    Appl Bioinformatics; 2003; 2(3):165-8. PubMed ID: 15130803
    [TBL] [Abstract][Full Text] [Related]  

    [Previous]   [Next]    [New Search]
    of 7.