159 related articles for article (PubMed ID: 19280006)
1. Determination of pair-wise inter-residue interaction forces from folding pathways and their implementation in coarse-grained folding prediction.
Baday S; Erman B; Arkun Y
Phys Chem Chem Phys; 2009 Mar; 11(12):1949-61. PubMed ID: 19280006
[TBL] [Abstract][Full Text] [Related]
2. Optimum folding pathways of proteins: their determination and properties.
Güner U; Arkun Y; Erman B
J Chem Phys; 2006 Apr; 124(13):134911. PubMed ID: 16613481
[TBL] [Abstract][Full Text] [Related]
3. Dependence of folding dynamics and structural stability on the location of a hydrophobic pair in beta-hairpins.
Imamura H; Chen JZ
Proteins; 2006 May; 63(3):555-70. PubMed ID: 16485280
[TBL] [Abstract][Full Text] [Related]
4. Development of novel statistical potentials for protein fold recognition.
Buchete NV; Straub JE; Thirumalai D
Curr Opin Struct Biol; 2004 Apr; 14(2):225-32. PubMed ID: 15093838
[TBL] [Abstract][Full Text] [Related]
5. A coarse-grained model and associated lattice Monte Carlo simulation of the coil-helix transition of a homopolypeptide.
Chen Y; Zhang Q; Ding J
J Chem Phys; 2004 Feb; 120(7):3467-74. PubMed ID: 15268504
[TBL] [Abstract][Full Text] [Related]
6. A coarse-grained protein force field for folding and structure prediction.
Maupetit J; Tuffery P; Derreumaux P
Proteins; 2007 Nov; 69(2):394-408. PubMed ID: 17600832
[TBL] [Abstract][Full Text] [Related]
7. Identification of characteristic protein folding channels in a coarse-grained hydrophobic-polar peptide model.
Schnabel S; Bachmann M; Janke W
J Chem Phys; 2007 Mar; 126(10):105102. PubMed ID: 17362088
[TBL] [Abstract][Full Text] [Related]
8. Ab initio discrete molecular dynamics approach to protein folding and aggregation.
Urbanc B; Borreguero JM; Cruz L; Stanley HE
Methods Enzymol; 2006; 412():314-38. PubMed ID: 17046666
[TBL] [Abstract][Full Text] [Related]
9. Symmetric connectivity of secondary structure elements enhances the diversity of folding pathways.
Klimov DK; Thirumalai D
J Mol Biol; 2005 Nov; 353(5):1171-86. PubMed ID: 16219323
[TBL] [Abstract][Full Text] [Related]
10. Energy minimizations with a combination of two knowledge-based potentials for protein folding.
de Sancho D; Rey A
J Comput Chem; 2008 Jul; 29(10):1684-92. PubMed ID: 18351603
[TBL] [Abstract][Full Text] [Related]
11. Minimal model for studying prion-like folding pathways.
Chen JZ; Lemak AS; Lepock JR; Kemp JP
Proteins; 2003 May; 51(2):283-8. PubMed ID: 12660996
[TBL] [Abstract][Full Text] [Related]
12. Predicting transmembrane helix pair configurations with knowledge-based distance-dependent pair potentials.
Wendel C; Gohlke H
Proteins; 2008 Feb; 70(3):984-99. PubMed ID: 17847096
[TBL] [Abstract][Full Text] [Related]
13. Packing of transmembrane helices in bacteriorhodopsin folding: structure and thermodynamics.
Chen CC; Wei CC; Sun YC; Chen CM
J Struct Biol; 2008 May; 162(2):237-47. PubMed ID: 18262435
[TBL] [Abstract][Full Text] [Related]
14. The complex folding pathways of protein A suggest a multiple-funnelled energy landscape.
St-Pierre JF; Mousseau N; Derreumaux P
J Chem Phys; 2008 Jan; 128(4):045101. PubMed ID: 18248008
[TBL] [Abstract][Full Text] [Related]
15. Coarse-grained models of protein folding: toy models or predictive tools?
Clementi C
Curr Opin Struct Biol; 2008 Feb; 18(1):10-5. PubMed ID: 18160277
[TBL] [Abstract][Full Text] [Related]
16. Peptide folding using multiscale coarse-grained models.
Thorpe IF; Zhou J; Voth GA
J Phys Chem B; 2008 Oct; 112(41):13079-90. PubMed ID: 18808094
[TBL] [Abstract][Full Text] [Related]
17. Dynamic control of protein folding pathway with a polymer of tunable hydrophobicity.
Lu D; Wu J; Liu Z
J Phys Chem B; 2007 Oct; 111(42):12303-9. PubMed ID: 17914802
[TBL] [Abstract][Full Text] [Related]
18. Importance of sequence specificity for predicting protein folding pathways: perturbed Gaussian chain model.
Kameda T
Proteins; 2003 Nov; 53(3):616-28. PubMed ID: 14579353
[TBL] [Abstract][Full Text] [Related]
19. Thermodynamics of Go-type models for protein folding.
Prieto L; de Sancho D; Rey A
J Chem Phys; 2005 Oct; 123(15):154903. PubMed ID: 16252968
[TBL] [Abstract][Full Text] [Related]
20. Folding pathways and rates for the three-stranded beta-sheet peptide Beta3s using discrete path sampling.
Carr JM; Wales DJ
J Phys Chem B; 2008 Jul; 112(29):8760-9. PubMed ID: 18588333
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
