342 related articles for article (PubMed ID: 19345092)
1. Molecular dynamics simulations of membrane channels and transporters.
Khalili-Araghi F; Gumbart J; Wen PC; Sotomayor M; Tajkhorshid E; Schulten K
Curr Opin Struct Biol; 2009 Apr; 19(2):128-37. PubMed ID: 19345092
[TBL] [Abstract][Full Text] [Related]
2. Molecular dynamics simulations of proteins in lipid bilayers.
Gumbart J; Wang Y; Aksimentiev A; Tajkhorshid E; Schulten K
Curr Opin Struct Biol; 2005 Aug; 15(4):423-31. PubMed ID: 16043343
[TBL] [Abstract][Full Text] [Related]
3. Computer simulations of transport through membranes: passive diffusion, pores, channels and transporters.
Tieleman DP
Clin Exp Pharmacol Physiol; 2006 Oct; 33(10):893-903. PubMed ID: 17002665
[TBL] [Abstract][Full Text] [Related]
4. Ion channel-transporter interactions.
Neverisky DL; Abbott GW
Crit Rev Biochem Mol Biol; 2015; 51(4):257-67. PubMed ID: 27098917
[TBL] [Abstract][Full Text] [Related]
5. Insights into the function of ion channels by computational electrophysiology simulations.
Kutzner C; Köpfer DA; Machtens JP; de Groot BL; Song C; Zachariae U
Biochim Biophys Acta; 2016 Jul; 1858(7 Pt B):1741-52. PubMed ID: 26874204
[TBL] [Abstract][Full Text] [Related]
6. Microscopic Characterization of Membrane Transporter Function by In Silico Modeling and Simulation.
Vermaas JV; Trebesch N; Mayne CG; Thangapandian S; Shekhar M; Mahinthichaichan P; Baylon JL; Jiang T; Wang Y; Muller MP; Shinn E; Zhao Z; Wen PC; Tajkhorshid E
Methods Enzymol; 2016; 578():373-428. PubMed ID: 27497175
[TBL] [Abstract][Full Text] [Related]
7. Permeating disciplines: Overcoming barriers between molecular simulations and classical structure-function approaches in biological ion transport.
Howard RJ; Carnevale V; Delemotte L; Hellmich UA; Rothberg BS
Biochim Biophys Acta Biomembr; 2018 Apr; 1860(4):927-942. PubMed ID: 29258839
[TBL] [Abstract][Full Text] [Related]
8. Molecular modeling and simulation studies of ion channel structures, dynamics and mechanisms.
Tai K; Fowler P; Mokrab Y; Stansfeld P; Sansom MS
Methods Cell Biol; 2008; 90():233-65. PubMed ID: 19195554
[TBL] [Abstract][Full Text] [Related]
9. Water in Nanopores and Biological Channels: A Molecular Simulation Perspective.
Lynch CI; Rao S; Sansom MSP
Chem Rev; 2020 Sep; 120(18):10298-10335. PubMed ID: 32841020
[TBL] [Abstract][Full Text] [Related]
10. Computational characterization of structural dynamics underlying function in active membrane transporters.
Li J; Wen PC; Moradi M; Tajkhorshid E
Curr Opin Struct Biol; 2015 Apr; 31():96-105. PubMed ID: 25913536
[TBL] [Abstract][Full Text] [Related]
11. Molecular packing and packing defects in helical membrane proteins.
Hildebrand PW; Rother K; Goede A; Preissner R; Frömmel C
Biophys J; 2005 Mar; 88(3):1970-7. PubMed ID: 15556989
[TBL] [Abstract][Full Text] [Related]
12. Selectivity and transport in aquaporins from molecular simulation studies.
Padhi S; Priyakumar UD
Vitam Horm; 2020; 112():47-70. PubMed ID: 32061349
[TBL] [Abstract][Full Text] [Related]
13. Atomistic Simulations of Membrane Ion Channel Conduction, Gating, and Modulation.
Flood E; Boiteux C; Lev B; Vorobyov I; Allen TW
Chem Rev; 2019 Jul; 119(13):7737-7832. PubMed ID: 31246417
[TBL] [Abstract][Full Text] [Related]
14. Simulations of outer membrane channels and their permeability.
Pothula KR; Solano CJ; Kleinekathöfer U
Biochim Biophys Acta; 2016 Jul; 1858(7 Pt B):1760-71. PubMed ID: 26721326
[TBL] [Abstract][Full Text] [Related]
15. Highlights from recently determined structures of membrane proteins: a focus on channels and transporters.
Sciara G; Mancia F
Curr Opin Struct Biol; 2012 Aug; 22(4):476-81. PubMed ID: 22472602
[TBL] [Abstract][Full Text] [Related]
16. Conformational landscapes of membrane proteins delineated by enhanced sampling molecular dynamics simulations.
Harpole TJ; Delemotte L
Biochim Biophys Acta Biomembr; 2018 Apr; 1860(4):909-926. PubMed ID: 29113819
[TBL] [Abstract][Full Text] [Related]
17. Computational studies of transport in ion channels using metadynamics.
Furini S; Domene C
Biochim Biophys Acta; 2016 Jul; 1858(7 Pt B):1733-40. PubMed ID: 26891818
[TBL] [Abstract][Full Text] [Related]
18. Water transport in AQP0 aquaporin: molecular dynamics studies.
Han BG; Guliaev AB; Walian PJ; Jap BK
J Mol Biol; 2006 Jul; 360(2):285-96. PubMed ID: 16756992
[TBL] [Abstract][Full Text] [Related]
19. Misfolded amyloid ion channels present mobile beta-sheet subunits in contrast to conventional ion channels.
Jang H; Arce FT; Capone R; Ramachandran S; Lal R; Nussinov R
Biophys J; 2009 Dec; 97(11):3029-37. PubMed ID: 19948133
[TBL] [Abstract][Full Text] [Related]
20. Molecular dynamics study of aquaporin-1 water channel in a lipid bilayer.
Zhu F; Tajkhorshid E; Schulten K
FEBS Lett; 2001 Aug; 504(3):212-8. PubMed ID: 11532456
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]