These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.
23. ProteoLens: a visual analytic tool for multi-scale database-driven biological network data mining. Huan T; Sivachenko AY; Harrison SH; Chen JY BMC Bioinformatics; 2008 Aug; 9 Suppl 9(Suppl 9):S5. PubMed ID: 18793469 [TBL] [Abstract][Full Text] [Related]
24. GeneKeyDB: a lightweight, gene-centric, relational database to support data mining environments. Kirov SA; Peng X; Baker E; Schmoyer D; Zhang B; Snoddy J BMC Bioinformatics; 2005 Mar; 6():72. PubMed ID: 15790402 [TBL] [Abstract][Full Text] [Related]
25. Genephony: a knowledge management tool for genome-wide research. Nuzzo A; Riva A BMC Bioinformatics; 2009 Sep; 10():278. PubMed ID: 19728881 [TBL] [Abstract][Full Text] [Related]
26. systemPipeR: NGS workflow and report generation environment. H Backman TW; Girke T BMC Bioinformatics; 2016 Sep; 17():388. PubMed ID: 27650223 [TBL] [Abstract][Full Text] [Related]
27. Web tools for predictive toxicology model building. Jeliazkova N Expert Opin Drug Metab Toxicol; 2012 Jul; 8(7):791-801. PubMed ID: 22577953 [TBL] [Abstract][Full Text] [Related]
28. mAPKL: R/ Bioconductor package for detecting gene exemplars and revealing their characteristics. Sakellariou A; Spyrou G BMC Bioinformatics; 2015 Sep; 16(1):291. PubMed ID: 26374744 [TBL] [Abstract][Full Text] [Related]
29. TargetSearch--a Bioconductor package for the efficient preprocessing of GC-MS metabolite profiling data. Cuadros-Inostroza A; Caldana C; Redestig H; Kusano M; Lisec J; Peña-Cortés H; Willmitzer L; Hannah MA BMC Bioinformatics; 2009 Dec; 10():428. PubMed ID: 20015393 [TBL] [Abstract][Full Text] [Related]
30. BioMAJ: a flexible framework for databanks synchronization and processing. Filangi O; Beausse Y; Assi A; Legrand L; Larré JM; Martin V; Collin O; Caron C; Leroy H; Allouche D Bioinformatics; 2008 Aug; 24(16):1823-5. PubMed ID: 18593718 [TBL] [Abstract][Full Text] [Related]
31. KDE Bioscience: platform for bioinformatics analysis workflows. Lu Q; Hao P; Curcin V; He W; Li YY; Luo QM; Guo YK; Li YX J Biomed Inform; 2006 Aug; 39(4):440-50. PubMed ID: 16260186 [TBL] [Abstract][Full Text] [Related]
32. CytoML for cross-platform cytometry data sharing. Finak G; Jiang W; Gottardo R Cytometry A; 2018 Dec; 93(12):1189-1196. PubMed ID: 30551257 [TBL] [Abstract][Full Text] [Related]
33. Extensible open source content management systems and frameworks: a solution for many needs of a bioinformatics group. Mooney SD; Baenziger PH Brief Bioinform; 2008 Jan; 9(1):69-74. PubMed ID: 18057072 [TBL] [Abstract][Full Text] [Related]
34. Apollo: Democratizing genome annotation. Dunn NA; Unni DR; Diesh C; Munoz-Torres M; Harris NL; Yao E; Rasche H; Holmes IH; Elsik CG; Lewis SE PLoS Comput Biol; 2019 Feb; 15(2):e1006790. PubMed ID: 30726205 [TBL] [Abstract][Full Text] [Related]
35. An extensible application for assembling annotation for genomic data. Zhang J; Carey V; Gentleman R Bioinformatics; 2003 Jan; 19(1):155-6. PubMed ID: 12499308 [TBL] [Abstract][Full Text] [Related]
36. Alkahest NuclearBLAST : a user-friendly BLAST management and analysis system. Diener SE; Houfek TD; Kalat SE; Windham DE; Burke M; Opperman C; Dean RA BMC Bioinformatics; 2005 Jun; 6():147. PubMed ID: 15958161 [TBL] [Abstract][Full Text] [Related]
37. HDCytoData: Collection of high-dimensional cytometry benchmark datasets in Bioconductor object formats. Weber LM; Soneson C F1000Res; 2019; 8():1459. PubMed ID: 31857895 [TBL] [Abstract][Full Text] [Related]
38. WebArray: an online platform for microarray data analysis. Xia X; McClelland M; Wang Y BMC Bioinformatics; 2005 Dec; 6():306. PubMed ID: 16371165 [TBL] [Abstract][Full Text] [Related]
39. ClusterControl: a web interface for distributing and monitoring bioinformatics applications on a Linux cluster. Stocker G; Rieder D; Trajanoski Z Bioinformatics; 2004 Mar; 20(5):805-7. PubMed ID: 14751976 [TBL] [Abstract][Full Text] [Related]
40. Evolution of web services in bioinformatics. Neerincx PB; Leunissen JA Brief Bioinform; 2005 Jun; 6(2):178-88. PubMed ID: 15975226 [TBL] [Abstract][Full Text] [Related] [Previous] [Next] [New Search]