83 related articles for article (PubMed ID: 19369501)
1. BEsTRF: a tool for optimal resolution of terminal-restriction fragment length polymorphism analysis based on user-defined primer-enzyme-sequence databases.
Stres B; Tiedje JM; Murovec B
Bioinformatics; 2009 Jun; 25(12):1556-8. PubMed ID: 19369501
[TBL] [Abstract][Full Text] [Related]
2. Use of primer selection and restriction enzymes to assess bacterial community diversity in an agricultural soil used for potato production via terminal restriction fragment length polymorphism.
Fortuna AM; Marsh TL; Honeycutt CW; Halteman WA
Appl Microbiol Biotechnol; 2011 Aug; 91(4):1193-202. PubMed ID: 21667276
[TBL] [Abstract][Full Text] [Related]
3. TRFMA: a web-based tool for terminal restriction fragment length polymorphism analysis based on molecular weight.
Nakano Y; Takeshita T; Yamashita Y
Bioinformatics; 2006 Jul; 22(14):1788-9. PubMed ID: 16709590
[TBL] [Abstract][Full Text] [Related]
4. Prim-SNPing: a primer designer for cost-effective SNP genotyping.
Chang HW; Chuang LY; Cheng YH; Hung YC; Wen CH; Gu DL; Yang CH
Biotechniques; 2009 May; 46(6):421-31. PubMed ID: 19480636
[TBL] [Abstract][Full Text] [Related]
5. Terminal restriction fragment length polymorphism analysis of ribosomal RNA genes to assess changes in fungal community structure in soils.
Edel-Hermann V; Dreumont C; Pérez-Piqueres A; Steinberg C
FEMS Microbiol Ecol; 2004 Mar; 47(3):397-404. PubMed ID: 19712328
[TBL] [Abstract][Full Text] [Related]
6. A novel strategy to extract specific phylogenetic sequence information from community T-RFLP.
Widmer F; Hartmann M; Frey B; Kölliker R
J Microbiol Methods; 2006 Sep; 66(3):512-20. PubMed ID: 16564584
[TBL] [Abstract][Full Text] [Related]
7. CloneAssistant 1.0: a stand-alone software for automated cloning primer design.
Shao C; Meng Y; Lv S; Zhong W; Wang Z; Chen M
J Biotechnol; 2010 Nov; 150(3):294-8. PubMed ID: 20887760
[TBL] [Abstract][Full Text] [Related]
8. Identification of 12 animal species meat by T-RFLP on the 12S rRNA gene.
Wang Q; Zhang X; Zhang HY; Zhang J; Chen GQ; Zhao DH; Ma HP; Liao WJ
Meat Sci; 2010 Jun; 85(2):265-9. PubMed ID: 20374896
[TBL] [Abstract][Full Text] [Related]
9. Novel phylogenetic assignment database for terminal-restriction fragment length polymorphism analysis of human colonic microbiota.
Matsumoto M; Sakamoto M; Hayashi H; Benno Y
J Microbiol Methods; 2005 Jun; 61(3):305-19. PubMed ID: 15767007
[TBL] [Abstract][Full Text] [Related]
10. Mutagenic primer design for mismatch PCR-RFLP SNP genotyping using a genetic algorithm.
Yang CH; Cheng YH; Yang CH; Chuang LY
IEEE/ACM Trans Comput Biol Bioinform; 2012; 9(3):837-45. PubMed ID: 22331864
[TBL] [Abstract][Full Text] [Related]
11. Genome-scale probe and primer design with PRIMEGENS.
Srivastava GP; Xu D
Methods Mol Biol; 2007; 402():159-76. PubMed ID: 17951795
[TBL] [Abstract][Full Text] [Related]
12. Restriction enzyme cleavage of fluorescently labeled DNA fragments--analysis of the method and its usage in examination of digestion completeness.
Ivancic-Jelecki J; Baricevic M; Santak M; Forcic D
Anal Biochem; 2006 Feb; 349(2):277-84. PubMed ID: 16403429
[TBL] [Abstract][Full Text] [Related]
13. Recognition of sequence-directed DNA structure by the Klenow fragment of DNA polymerase I.
Carver TE; Millar DP
Biochemistry; 1998 Feb; 37(7):1898-904. PubMed ID: 9485315
[TBL] [Abstract][Full Text] [Related]
14. Modified T-RFLP methods for taxonomic interpretation of T-RF.
Lee HK; Kim HR; Mengoni A; Lee DH
J Microbiol Biotechnol; 2008 Apr; 18(4):624-30. PubMed ID: 18467853
[TBL] [Abstract][Full Text] [Related]
15. QDD: a user-friendly program to select microsatellite markers and design primers from large sequencing projects.
Meglécz E; Costedoat C; Dubut V; Gilles A; Malausa T; Pech N; Martin JF
Bioinformatics; 2010 Feb; 26(3):403-4. PubMed ID: 20007741
[TBL] [Abstract][Full Text] [Related]
16. Application of a new PCR primer for terminal restriction fragment length polymorphism analysis of the bacterial communities in plant roots.
Sakai M; Matsuka A; Komura T; Kanazawa S
J Microbiol Methods; 2004 Oct; 59(1):81-9. PubMed ID: 15325755
[TBL] [Abstract][Full Text] [Related]
17. Culture-independent microbial community analysis with terminal restriction fragment length polymorphism.
Marsh TL
Methods Enzymol; 2005; 397():308-29. PubMed ID: 16260299
[TBL] [Abstract][Full Text] [Related]
18. SNP-RFLPing: restriction enzyme mining for SNPs in genomes.
Chang HW; Yang CH; Chang PL; Cheng YH; Chuang LY
BMC Genomics; 2006 Feb; 7():30. PubMed ID: 16503968
[TBL] [Abstract][Full Text] [Related]
19. [Polymerase chain reaction, cold probes and clinical diagnosis].
Haras D; Amoros JP
Sante; 1994; 4(1):43-52. PubMed ID: 7909267
[TBL] [Abstract][Full Text] [Related]
20. MiCA: a web-based tool for the analysis of microbial communities based on terminal-restriction fragment length polymorphisms of 16S and 18S rRNA genes.
Shyu C; Soule T; Bent SJ; Foster JA; Forney LJ
Microb Ecol; 2007 May; 53(4):562-70. PubMed ID: 17406775
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]