247 related articles for article (PubMed ID: 19378153)
1. DNA sequence polymorphism analysis using DnaSP.
Rozas J
Methods Mol Biol; 2009; 537():337-50. PubMed ID: 19378153
[TBL] [Abstract][Full Text] [Related]
2. DnaSP 6: DNA Sequence Polymorphism Analysis of Large Data Sets.
Rozas J; Ferrer-Mata A; Sánchez-DelBarrio JC; Guirao-Rico S; Librado P; Ramos-Onsins SE; Sánchez-Gracia A
Mol Biol Evol; 2017 Dec; 34(12):3299-3302. PubMed ID: 29029172
[TBL] [Abstract][Full Text] [Related]
3. DnaSP, DNA polymorphism analyses by the coalescent and other methods.
Rozas J; Sánchez-DelBarrio JC; Messeguer X; Rozas R
Bioinformatics; 2003 Dec; 19(18):2496-7. PubMed ID: 14668244
[TBL] [Abstract][Full Text] [Related]
4. VariScan: Analysis of evolutionary patterns from large-scale DNA sequence polymorphism data.
Vilella AJ; Blanco-Garcia A; Hutter S; Rozas J
Bioinformatics; 2005 Jun; 21(11):2791-3. PubMed ID: 15814564
[TBL] [Abstract][Full Text] [Related]
5. SNP-VISTA: an interactive SNP visualization tool.
Shah N; Teplitsky MV; Minovitsky S; Pennacchio LA; Hugenholtz P; Hamann B; Dubchak IL
BMC Bioinformatics; 2005 Dec; 6():292. PubMed ID: 16336665
[TBL] [Abstract][Full Text] [Related]
6. DnaSP version 2.0: a novel software package for extensive molecular population genetics analysis.
Rozas J; Rozas R
Comput Appl Biosci; 1997 Jun; 13(3):307-11. PubMed ID: 9183537
[TBL] [Abstract][Full Text] [Related]
7. SNP-PHAGE--High throughput SNP discovery pipeline.
Matukumalli LK; Grefenstette JJ; Hyten DL; Choi IY; Cregan PB; Van Tassell CP
BMC Bioinformatics; 2006 Oct; 7():468. PubMed ID: 17059604
[TBL] [Abstract][Full Text] [Related]
8. Single nucleotide polymorphism discovery in barley using autoSNPdb.
Duran C; Appleby N; Vardy M; Imelfort M; Edwards D; Batley J
Plant Biotechnol J; 2009 May; 7(4):326-33. PubMed ID: 19386041
[TBL] [Abstract][Full Text] [Related]
9. SEAN: SNP prediction and display program utilizing EST sequence clusters.
Huntley D; Baldo A; Johri S; Sergot M
Bioinformatics; 2006 Feb; 22(4):495-6. PubMed ID: 16357032
[TBL] [Abstract][Full Text] [Related]
10. SNPCEQer II: the integrated detection and analysis of SNPs in DNA sequences.
Tang F; Flood EM; Pertsemlidis A; Garner HR
Appl Bioinformatics; 2003; 2(3):151-4. PubMed ID: 15130800
[TBL] [Abstract][Full Text] [Related]
11. Mining for SNPs and SSRs using SNPServer, dbSNP and SSR taxonomy tree.
Batley J; Edwards D
Methods Mol Biol; 2009; 537():303-21. PubMed ID: 19378151
[TBL] [Abstract][Full Text] [Related]
12. Frequency Finder: a multi-source web application for collection of public allele frequencies of SNP markers.
Nguyen TH; Liu C; Gershon ES; McMahon FJ
Bioinformatics; 2004 Feb; 20(3):439-43. PubMed ID: 14960477
[TBL] [Abstract][Full Text] [Related]
13. SeqVis: a tool for detecting compositional heterogeneity among aligned nucleotide sequences.
Jermiin LS; Ho JW; Lau KW; Jayaswal V
Methods Mol Biol; 2009; 537():65-91. PubMed ID: 19378140
[TBL] [Abstract][Full Text] [Related]
14. Multiple alignment of DNA sequences with MAFFT.
Katoh K; Asimenos G; Toh H
Methods Mol Biol; 2009; 537():39-64. PubMed ID: 19378139
[TBL] [Abstract][Full Text] [Related]
15. Mining SNPs from DNA sequence data; computational approaches to SNP discovery and analysis.
van Oeveren J; Janssen A
Methods Mol Biol; 2009; 578():73-91. PubMed ID: 19768587
[TBL] [Abstract][Full Text] [Related]
16. MANTIS: a phylogenetic framework for multi-species genome comparisons.
Tzika AC; Helaers R; Van de Peer Y; Milinkovitch MC
Bioinformatics; 2008 Jan; 24(2):151-7. PubMed ID: 18025004
[TBL] [Abstract][Full Text] [Related]
17. SeqDoC: rapid SNP and mutation detection by direct comparison of DNA sequence chromatograms.
Crowe ML
BMC Bioinformatics; 2005 May; 6():133. PubMed ID: 15927052
[TBL] [Abstract][Full Text] [Related]
18. GenoMiner: a tool for genome-wide search of coding and non-coding conserved sequence tags.
Castrignanò T; De Meo PD; Grillo G; Liuni S; Mignone F; Talamo IG; Pesole G
Bioinformatics; 2006 Feb; 22(4):497-9. PubMed ID: 16267081
[TBL] [Abstract][Full Text] [Related]
19. SNP mining porcine ESTs with MAVIANT, a novel tool for SNP evaluation and annotation.
Panitz F; Stengaard H; Hornshøj H; Gorodkin J; Hedegaard J; Cirera S; Thomsen B; Madsen LB; Høj A; Vingborg RK; Zahn B; Wang X; Wang X; Wernersson R; Jørgensen CB; Scheibye-Knudsen K; Arvin T; Lumholdt S; Sawera M; Green T; Nielsen BJ; Havgaard JH; Brunak S; Fredholm M; Bendixen C
Bioinformatics; 2007 Jul; 23(13):i387-91. PubMed ID: 17646321
[TBL] [Abstract][Full Text] [Related]
20. hybseek: pathogen primer design tool for diagnostic multi-analyte assays.
Frech C; Breuer K; Ronacher B; Kern T; Sohn C; Gebauer G
Comput Methods Programs Biomed; 2009 May; 94(2):152-60. PubMed ID: 19201047
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
