BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

128 related articles for article (PubMed ID: 19383526)

  • 1. Analysis of protein contacts into Protein Units.
    Faure G; Bornot A; de Brevern AG
    Biochimie; 2009 Jul; 91(7):876-87. PubMed ID: 19383526
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Inter-residue interactions in protein folding and stability.
    Gromiha MM; Selvaraj S
    Prog Biophys Mol Biol; 2004 Oct; 86(2):235-77. PubMed ID: 15288760
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Protein contacts, inter-residue interactions and side-chain modelling.
    Faure G; Bornot A; de Brevern AG
    Biochimie; 2008 Apr; 90(4):626-39. PubMed ID: 18086572
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Analyzing the sequence-structure relationship of a library of local structural prototypes.
    Benros C; de Brevern AG; Hazout S
    J Theor Biol; 2009 Jan; 256(2):215-26. PubMed ID: 18977232
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Sequence and structural analysis of two designed proteins with 88% identity adopting different folds.
    Saravanan KM; Balasubramanian H; Nallusamy S; Samuel S
    Protein Eng Des Sel; 2010 Dec; 23(12):911-8. PubMed ID: 20952437
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Protein Peeling 2: a web server to convert protein structures into series of protein units.
    Gelly JC; Etchebest C; Hazout S; de Brevern AG
    Nucleic Acids Res; 2006 Jul; 34(Web Server issue):W75-8. PubMed ID: 16845113
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Network scaling invariants help to elucidate basic topological principles of proteins.
    Krishnan A; Giuliani A; Zbilut JP; Tomita M
    J Proteome Res; 2007 Oct; 6(10):3924-34. PubMed ID: 17850063
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Comparative analysis of threshold and tessellation methods for determining protein contacts.
    Esque J; Oguey C; de Brevern AG
    J Chem Inf Model; 2011 Feb; 51(2):493-507. PubMed ID: 21226523
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Characterizing conserved structural contacts by pair-wise relative contacts and relative packing groups.
    Holmes JB; Tsai J
    J Mol Biol; 2005 Dec; 354(3):706-21. PubMed ID: 16269154
    [TBL] [Abstract][Full Text] [Related]  

  • 10. 'Protein Peeling': an approach for splitting a 3D protein structure into compact fragments.
    Gelly JC; de Brevern AG; Hazout S
    Bioinformatics; 2006 Jan; 22(2):129-33. PubMed ID: 16301202
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Description and recognition of regular and distorted secondary structures in proteins using the automated protein structure analysis method.
    Ranganathan S; Izotov D; Kraka E; Cremer D
    Proteins; 2009 Aug; 76(2):418-38. PubMed ID: 19205025
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Nonrandom distribution of intramolecular contacts in native single-domain proteins.
    Mounce BC; Kurt N; Ellison PA; Cavagnero S
    Proteins; 2009 May; 75(2):404-12. PubMed ID: 18831044
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Self-contacts in Asx and Glx residues of high-resolution protein structures: role of local environment and tertiary interactions.
    Pal TK; Sankararamakrishnan R
    J Mol Graph Model; 2008 Aug; 27(1):20-33. PubMed ID: 18343699
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Comprehensive description of protein structures using protein folding shape code.
    Yang J
    Proteins; 2008 May; 71(3):1497-518. PubMed ID: 18214949
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Taking advantage of local structure descriptors to analyze interresidue contacts in protein structures and protein complexes.
    Martin J; Regad L; Etchebest C; Camproux AC
    Proteins; 2008 Nov; 73(3):672-89. PubMed ID: 18491388
    [TBL] [Abstract][Full Text] [Related]  

  • 16. [Optimal relationship between average conformational entropy and average energy of interactions between residues for fast protein folding].
    Galzitskaia OV; Garbuzinskiĭ SA
    Biofizika; 2006; 51(4):622-32. PubMed ID: 16909839
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Protein folding rates estimated from contact predictions.
    Punta M; Rost B
    J Mol Biol; 2005 May; 348(3):507-12. PubMed ID: 15826649
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Comparing four different approaches for the determination of inter-residue interactions provides insight for the structure prediction of helical membrane proteins.
    Gao J; Li Z
    Biopolymers; 2009 Jul; 91(7):547-56. PubMed ID: 19241463
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Predicting protein function from domain content.
    Forslund K; Sonnhammer EL
    Bioinformatics; 2008 Aug; 24(15):1681-7. PubMed ID: 18591194
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Prediction of protein secondary structures from conformational biases.
    Hoang TX; Cieplak M; Banavar JR; Maritan A
    Proteins; 2002 Aug; 48(3):558-65. PubMed ID: 12112678
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 7.