305 related articles for article (PubMed ID: 19383983)
61. Codon phylogenetic distance.
Michel CJ
Comput Biol Chem; 2007 Feb; 31(1):36-43. PubMed ID: 17257898
[TBL] [Abstract][Full Text] [Related]
62. An evolutionary space-time model with varying among-site dependencies.
Stern A; Pupko T
Mol Biol Evol; 2006 Feb; 23(2):392-400. PubMed ID: 16267143
[TBL] [Abstract][Full Text] [Related]
63. Brownian models and coalescent structures.
Blum MG; Damerval C; Manel S; François O
Theor Popul Biol; 2004 May; 65(3):249-61. PubMed ID: 15066421
[TBL] [Abstract][Full Text] [Related]
64. Comparison of three methods for estimating rates of synonymous and nonsynonymous nucleotide substitutions.
Tzeng YH; Pan R; Li WH
Mol Biol Evol; 2004 Dec; 21(12):2290-8. PubMed ID: 15329386
[TBL] [Abstract][Full Text] [Related]
65. A derived Markov process for modeling reaction networks.
Holland JH
Evol Comput; 2003; 11(4):339-62. PubMed ID: 14629862
[TBL] [Abstract][Full Text] [Related]
66. Pseudo-likelihood analysis of codon substitution models with neighbor-dependent rates.
Christensen OF; Hobolth A; Jensen JL
J Comput Biol; 2005 Nov; 12(9):1166-82. PubMed ID: 16305327
[TBL] [Abstract][Full Text] [Related]
67. Detecting Adaptation in Protein-Coding Genes Using a Bayesian Site-Heterogeneous Mutation-Selection Codon Substitution Model.
Rodrigue N; Lartillot N
Mol Biol Evol; 2017 Jan; 34(1):204-214. PubMed ID: 27744408
[TBL] [Abstract][Full Text] [Related]
68. Context-dependent substitution models for circular DNA.
Zhang R; Yap VB
Infect Genet Evol; 2013 Aug; 18():362-6. PubMed ID: 23499773
[TBL] [Abstract][Full Text] [Related]
69. Phylogenetic estimation under codon models can be biased by codon usage heterogeneity.
Inagaki Y; Roger AJ
Mol Phylogenet Evol; 2006 Aug; 40(2):428-34. PubMed ID: 16647273
[TBL] [Abstract][Full Text] [Related]
70. Computing Ka and Ks with a consideration of unequal transitional substitutions.
Zhang Z; Li J; Yu J
BMC Evol Biol; 2006 Jun; 6():44. PubMed ID: 16740169
[TBL] [Abstract][Full Text] [Related]
71. Accounting for gene rate heterogeneity in phylogenetic inference.
Bevan RB; Bryant D; Lang BF
Syst Biol; 2007 Apr; 56(2):194-205. PubMed ID: 17464878
[TBL] [Abstract][Full Text] [Related]
72. Two stationary nonhomogeneous Markov models of nucleotide sequence evolution.
Jayaswal V; Jermiin LS; Poladian L; Robinson J
Syst Biol; 2011 Jan; 60(1):74-86. PubMed ID: 21081482
[TBL] [Abstract][Full Text] [Related]
73. A stochastic gene evolution model with time dependent mutations.
Bahi JM; Michel CJ
Bull Math Biol; 2004 Jul; 66(4):763-78. PubMed ID: 15210317
[TBL] [Abstract][Full Text] [Related]
74. A simple hierarchical approach to modeling distributions of substitution rates.
Pond SL; Frost SD
Mol Biol Evol; 2005 Feb; 22(2):223-34. PubMed ID: 15483327
[TBL] [Abstract][Full Text] [Related]
75. Markov invariants, plethysms, and phylogenetics.
Sumner JG; Charleston MA; Jermiin LS; Jarvis PD
J Theor Biol; 2008 Aug; 253(3):601-15. PubMed ID: 18513747
[TBL] [Abstract][Full Text] [Related]
76. Artifactual phylogenies caused by correlated distribution of substitution rates among sites and lineages: the good, the bad, and the ugly.
Ruano-Rubio V; Fares MA
Syst Biol; 2007 Feb; 56(1):68-82. PubMed ID: 17366138
[TBL] [Abstract][Full Text] [Related]
77. Coalescent methods for estimating phylogenetic trees.
Liu L; Yu L; Kubatko L; Pearl DK; Edwards SV
Mol Phylogenet Evol; 2009 Oct; 53(1):320-8. PubMed ID: 19501178
[TBL] [Abstract][Full Text] [Related]
78. Phylogenetic mixture models can reduce node-density artifacts.
Venditti C; Meade A; Pagel M
Syst Biol; 2008 Apr; 57(2):286-93. PubMed ID: 18432549
[TBL] [Abstract][Full Text] [Related]
79. A conservative parametric approach to motif significance analysis.
Keich U; Ng P
Genome Inform; 2007; 19():61-72. PubMed ID: 18546505
[TBL] [Abstract][Full Text] [Related]
80. Using phylochronology to reveal cryptic population histories: review and synthesis of 29 ancient DNA studies.
Ramakrishnan U; Hadly EA
Mol Ecol; 2009 Apr; 18(7):1310-30. PubMed ID: 19281471
[TBL] [Abstract][Full Text] [Related]
[Previous] [Next] [New Search]
