These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

205 related articles for article (PubMed ID: 19406927)

  • 1. GeNMR: a web server for rapid NMR-based protein structure determination.
    Berjanskii M; Tang P; Liang J; Cruz JA; Zhou J; Zhou Y; Bassett E; MacDonell C; Lu P; Lin G; Wishart DS
    Nucleic Acids Res; 2009 Jul; 37(Web Server issue):W670-7. PubMed ID: 19406927
    [TBL] [Abstract][Full Text] [Related]  

  • 2. CS23D: a web server for rapid protein structure generation using NMR chemical shifts and sequence data.
    Wishart DS; Arndt D; Berjanskii M; Tang P; Zhou J; Lin G
    Nucleic Acids Res; 2008 Jul; 36(Web Server issue):W496-502. PubMed ID: 18515350
    [TBL] [Abstract][Full Text] [Related]  

  • 3. PROSESS: a protein structure evaluation suite and server.
    Berjanskii M; Liang Y; Zhou J; Tang P; Stothard P; Zhou Y; Cruz J; MacDonell C; Lin G; Lu P; Wishart DS
    Nucleic Acids Res; 2010 Jul; 38(Web Server issue):W633-40. PubMed ID: 20460469
    [TBL] [Abstract][Full Text] [Related]  

  • 4. PREDITOR: a web server for predicting protein torsion angle restraints.
    Berjanskii MV; Neal S; Wishart DS
    Nucleic Acids Res; 2006 Jul; 34(Web Server issue):W63-9. PubMed ID: 16845087
    [TBL] [Abstract][Full Text] [Related]  

  • 5. BioMagResBank databases DOCR and FRED containing converted and filtered sets of experimental NMR restraints and coordinates from over 500 protein PDB structures.
    Doreleijers JF; Nederveen AJ; Vranken W; Lin J; Bonvin AM; Kaptein R; Markley JL; Ulrich EL
    J Biomol NMR; 2005 May; 32(1):1-12. PubMed ID: 16041478
    [TBL] [Abstract][Full Text] [Related]  

  • 6. BioMagResBank (BMRB) as a Resource for Structural Biology.
    Romero PR; Kobayashi N; Wedell JR; Baskaran K; Iwata T; Yokochi M; Maziuk D; Yao H; Fujiwara T; Kurusu G; Ulrich EL; Hoch JC; Markley JL
    Methods Mol Biol; 2020; 2112():187-218. PubMed ID: 32006287
    [TBL] [Abstract][Full Text] [Related]  

  • 7. NMRe: a web server for NMR protein structure refinement with high-quality structure validation scores.
    Ryu H; Lim G; Sung BH; Lee J
    Bioinformatics; 2016 Feb; 32(4):611-3. PubMed ID: 26504145
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Rapid and reliable protein structure determination via chemical shift threading.
    Hafsa NE; Berjanskii MV; Arndt D; Wishart DS
    J Biomol NMR; 2018 Jan; 70(1):33-51. PubMed ID: 29196969
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Accurate prediction of protein torsion angles using chemical shifts and sequence homology.
    Neal S; Berjanskii M; Zhang H; Wishart DS
    Magn Reson Chem; 2006 Jul; 44 Spec No():S158-67. PubMed ID: 16823900
    [TBL] [Abstract][Full Text] [Related]  

  • 10. BioMagResBank database with sets of experimental NMR constraints corresponding to the structures of over 1400 biomolecules deposited in the Protein Data Bank.
    Doreleijers JF; Mading S; Maziuk D; Sojourner K; Yin L; Zhu J; Markley JL; Ulrich EL
    J Biomol NMR; 2003 Jun; 26(2):139-46. PubMed ID: 12766409
    [TBL] [Abstract][Full Text] [Related]  

  • 11. CSI 3.0: a web server for identifying secondary and super-secondary structure in proteins using NMR chemical shifts.
    Hafsa NE; Arndt D; Wishart DS
    Nucleic Acids Res; 2015 Jul; 43(W1):W370-7. PubMed ID: 25979265
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Protein NMR structure determination with automated NOE assignment using the new software CANDID and the torsion angle dynamics algorithm DYANA.
    Herrmann T; Güntert P; Wüthrich K
    J Mol Biol; 2002 May; 319(1):209-27. PubMed ID: 12051947
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Simultaneous single-structure and bundle representation of protein NMR structures in torsion angle space.
    Gottstein D; Kirchner DK; Güntert P
    J Biomol NMR; 2012 Apr; 52(4):351-64. PubMed ID: 22351031
    [TBL] [Abstract][Full Text] [Related]  

  • 14. A robust algorithm for optimizing protein structures with NMR chemical shifts.
    Berjanskii M; Arndt D; Liang Y; Wishart DS
    J Biomol NMR; 2015 Nov; 63(3):255-64. PubMed ID: 26345175
    [TBL] [Abstract][Full Text] [Related]  

  • 15. The AUDANA algorithm for automated protein 3D structure determination from NMR NOE data.
    Lee W; Petit CM; Cornilescu G; Stark JL; Markley JL
    J Biomol NMR; 2016 Jun; 65(2):51-7. PubMed ID: 27169728
    [TBL] [Abstract][Full Text] [Related]  

  • 16. BioMagResBank (BMRB) as a partner in the Worldwide Protein Data Bank (wwPDB): new policies affecting biomolecular NMR depositions.
    Markley JL; Ulrich EL; Berman HM; Henrick K; Nakamura H; Akutsu H
    J Biomol NMR; 2008 Mar; 40(3):153-5. PubMed ID: 18288446
    [TBL] [Abstract][Full Text] [Related]  

  • 17. REDCRAFT: A computational platform using residual dipolar coupling NMR data for determining structures of perdeuterated proteins in solution.
    Cole CA; Daigham NS; Liu G; Montelione GT; Valafar H
    PLoS Comput Biol; 2021 Feb; 17(2):e1008060. PubMed ID: 33524015
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Performance of the WeNMR CS-Rosetta3 web server in CASD-NMR.
    van der Schot G; Bonvin AM
    J Biomol NMR; 2015 Aug; 62(4):497-502. PubMed ID: 25982706
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Restraint validation of biomolecular structures determined by NMR in the Protein Data Bank.
    Baskaran K; Ploskon E; Tejero R; Yokochi M; Harrus D; Liang Y; Peisach E; Persikova I; Ramelot TA; Sekharan M; Tolchard J; Westbrook JD; Bardiaux B; Schwieters CD; Patwardhan A; Velankar S; Burley SK; Kurisu G; Hoch JC; Montelione GT; Vuister GW; Young JY
    Structure; 2024 Jun; 32(6):824-837.e1. PubMed ID: 38490206
    [TBL] [Abstract][Full Text] [Related]  

  • 20. NRG-CING: integrated validation reports of remediated experimental biomolecular NMR data and coordinates in wwPDB.
    Doreleijers JF; Vranken WF; Schulte C; Markley JL; Ulrich EL; Vriend G; Vuister GW
    Nucleic Acids Res; 2012 Jan; 40(Database issue):D519-24. PubMed ID: 22139937
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 11.