BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

209 related articles for article (PubMed ID: 19413302)

  • 1. Interpretation of tandem mass spectra obtained from cyclic nonribosomal peptides.
    Liu WT; Ng J; Meluzzi D; Bandeira N; Gutierrez M; Simmons TL; Schultz AW; Linington RG; Moore BS; Gerwick WH; Pevzner PA; Dorrestein PC
    Anal Chem; 2009 Jun; 81(11):4200-9. PubMed ID: 19413302
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Annotating and Interpreting Linear and Cyclic Peptide Tandem Mass Spectra.
    Niedermeyer TH
    Methods Mol Biol; 2016; 1401():199-207. PubMed ID: 26831710
    [TBL] [Abstract][Full Text] [Related]  

  • 3. mMass as a software tool for the annotation of cyclic peptide tandem mass spectra.
    Niedermeyer TH; Strohalm M
    PLoS One; 2012; 7(9):e44913. PubMed ID: 23028676
    [TBL] [Abstract][Full Text] [Related]  

  • 4. The spectral networks paradigm in high throughput mass spectrometry.
    Guthals A; Watrous JD; Dorrestein PC; Bandeira N
    Mol Biosyst; 2012 Oct; 8(10):2535-44. PubMed ID: 22610447
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Sequencing Orbitides by Acid-Mediated Ring Cleavage Followed by Tandem Mass Spectrometry.
    Fisher MF; Mylne JS
    J Proteome Res; 2019 Nov; 18(11):4065-4071. PubMed ID: 31566373
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Structural characterization of cyclosporin A, C and microbial bio-transformed cyclosporin A analog AM6 using HPLC-ESI-ion trap-mass spectrometry.
    Ahn EY; Shrestha A; Hoang NH; Huong NL; Yoon YJ; Park JW
    Talanta; 2014 Jun; 123():89-94. PubMed ID: 24725868
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Formation of diagnostic product ions from cyanobacterial cyclic peptides by the two-bond fission mechanism using ion trap liquid chromatography/multi-stage mass spectrometry.
    Mayumi T; Kato H; Kawasaki Y; Harada K
    Rapid Commun Mass Spectrom; 2007; 21(6):1025-33. PubMed ID: 17318805
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Rapid Unambiguous Structure Elucidation of Streptnatamide A, a New Cyclic Peptide Isolated from A Marine-derived Streptomyces sp.
    Yan JX; Wu Q; Maity M; Braun DR; Alas I; Wang X; Yin X; Zhu Y; Bell BA; Rajski SR; Ge Y; Richardson DD; Zhong W; Bugni TS
    Chemistry; 2023 Oct; 29(56):e202301813. PubMed ID: 37452377
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Fragmentation of biotinylated cyclic peptides.
    Lassman ME; Kulagina N; Taitt CR
    Rapid Commun Mass Spectrom; 2004; 18(12):1277-85. PubMed ID: 15174181
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Characterization of the dehydration products due to thermal decomposition of peptides by liquid chromatography-tandem mass spectrometry.
    Liu C; Topchiy E; Lehmann T; Basile F
    J Mass Spectrom; 2015 Mar; 50(3):625-32. PubMed ID: 25800200
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Sequence elucidation of an unknown cyclic peptide of high doping potential by ETD and CID tandem mass spectrometry.
    Guan F; Uboh CE; Soma LR; Rudy J
    J Am Soc Mass Spectrom; 2011 Apr; 22(4):718-30. PubMed ID: 21472610
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Gold(I) Cationization Promotes Ring Opening in Lysine-Containing Cyclic Peptides.
    Foreman DJ; Lawler JT; Niedrauer ML; Hostetler MA; McLuckey SA
    J Am Soc Mass Spectrom; 2019 Oct; 30(10):1914-1922. PubMed ID: 31250319
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Analytical utility of mass spectral binning in proteomic experiments by SPectral Immonium Ion Detection (SPIID).
    Kelstrup CD; Frese C; Heck AJ; Olsen JV; Nielsen ML
    Mol Cell Proteomics; 2014 Aug; 13(8):1914-24. PubMed ID: 24895383
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Multiplex de novo sequencing of peptide antibiotics.
    Mohimani H; Liu WT; Yang YL; Gaudêncio SP; Fenical W; Dorrestein PC; Pevzner PA
    J Comput Biol; 2011 Nov; 18(11):1371-81. PubMed ID: 22035290
    [TBL] [Abstract][Full Text] [Related]  

  • 15. CycloBranch: De Novo Sequencing of Nonribosomal Peptides from Accurate Product Ion Mass Spectra.
    Novák J; Lemr K; Schug KA; Havlíček V
    J Am Soc Mass Spectrom; 2015 Oct; 26(10):1780-6. PubMed ID: 26195308
    [TBL] [Abstract][Full Text] [Related]  

  • 16. CYCLONE--a utility for de novo sequencing of microbial cyclic peptides.
    Kavan D; Kuzma M; Lemr K; Schug KA; Havlicek V
    J Am Soc Mass Spectrom; 2013 Aug; 24(8):1177-84. PubMed ID: 23702710
    [TBL] [Abstract][Full Text] [Related]  

  • 17. MS_Piano: A Software Tool for Annotating Peaks in CID Tandem Mass Spectra of Peptides and N-Glycopeptides.
    Yang X; Neta P; Mirokhin YA; Tchekhovskoi DV; Remoroza CA; Burke MC; Liang Y; Markey SP; Stein SE
    J Proteome Res; 2021 Sep; 20(9):4603-4609. PubMed ID: 34264676
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Whole cell matrix-assisted laser desorption/ionization time-of-flight mass spectrometry and in situ structure analysis of streptocidins, a family of tyrocidine-like cyclic peptides.
    Hitzeroth G; Vater J; Franke P; Gebhardt K; Fiedler HP
    Rapid Commun Mass Spectrom; 2005; 19(20):2935-42. PubMed ID: 16175658
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Exploitation of the Ornithine Effect Enhances Characterization of Stapled and Cyclic Peptides.
    Crittenden CM; Parker WR; Jenner ZB; Bruns KA; Akin LD; McGee WM; Ciccimaro E; Brodbelt JS
    J Am Soc Mass Spectrom; 2016 May; 27(5):856-63. PubMed ID: 26864791
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Rapid and Definitive Identification of Cyclic Peptide Soft Spots by Isotope-Labeled Reductive Dimethylation and Mass Spectrometry Fragmentation.
    Feng Y; Qirjollari A; Fawaz MV; Cancilla MT; Gonzalez RJ; Pearson K
    Anal Chem; 2024 May; 96(19):7756-7762. PubMed ID: 38690743
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 11.