191 related articles for article (PubMed ID: 19416516)
1. Weak preservation of local neutral substitution rates across mammalian genomes.
Imamura H; Karro JE; Chuang JH
BMC Evol Biol; 2009 May; 9():89. PubMed ID: 19416516
[TBL] [Abstract][Full Text] [Related]
2. Similarity of synonymous substitution rates across mammalian genomes.
Chuang JH; Li H
J Mol Evol; 2007 Sep; 65(3):236-48. PubMed ID: 17674075
[TBL] [Abstract][Full Text] [Related]
3. Detection of nonneutral substitution rates on mammalian phylogenies.
Pollard KS; Hubisz MJ; Rosenbloom KR; Siepel A
Genome Res; 2010 Jan; 20(1):110-21. PubMed ID: 19858363
[TBL] [Abstract][Full Text] [Related]
4. Rates of genome evolution and branching order from whole genome analysis.
Huttley GA; Wakefield MJ; Easteal S
Mol Biol Evol; 2007 Aug; 24(8):1722-30. PubMed ID: 17494028
[TBL] [Abstract][Full Text] [Related]
5. Reconstructing large regions of an ancestral mammalian genome in silico.
Blanchette M; Green ED; Miller W; Haussler D
Genome Res; 2004 Dec; 14(12):2412-23. PubMed ID: 15574820
[TBL] [Abstract][Full Text] [Related]
6. Distribution and intensity of constraint in mammalian genomic sequence.
Cooper GM; Stone EA; Asimenos G; ; Green ED; Batzoglou S; Sidow A
Genome Res; 2005 Jul; 15(7):901-13. PubMed ID: 15965027
[TBL] [Abstract][Full Text] [Related]
7. Detection of weakly conserved ancestral mammalian regulatory sequences by primate comparisons.
Wang QF; Prabhakar S; Chanan S; Cheng JF; Rubin EM; Boffelli D
Genome Biol; 2007; 8(1):R1. PubMed ID: 17201929
[TBL] [Abstract][Full Text] [Related]
8. Nonsynonymous substitution rate (Ka) is a relatively consistent parameter for defining fast-evolving and slow-evolving protein-coding genes.
Wang D; Liu F; Wang L; Huang S; Yu J
Biol Direct; 2011 Feb; 6():13. PubMed ID: 21342519
[TBL] [Abstract][Full Text] [Related]
9. Differences in molecular evolutionary rates among microRNAs in the human and chimpanzee genomes.
Santpere G; Lopez-Valenzuela M; Petit-Marty N; Navarro A; Espinosa-Parrilla Y
BMC Genomics; 2016 Jul; 17():528. PubMed ID: 27474039
[TBL] [Abstract][Full Text] [Related]
10. Genomic divergences among cattle, dog and human estimated from large-scale alignments of genomic sequences.
Liu GE; Matukumalli LK; Sonstegard TS; Shade LL; Van Tassell CP
BMC Genomics; 2006 Jun; 7():140. PubMed ID: 16759380
[TBL] [Abstract][Full Text] [Related]
11. A large family of ancient repeat elements in the human genome is under strong selection.
Kamal M; Xie X; Lander ES
Proc Natl Acad Sci U S A; 2006 Feb; 103(8):2740-5. PubMed ID: 16477033
[TBL] [Abstract][Full Text] [Related]
12. Reconstructing the phylogenetic history of long-term effective population size and life-history traits using patterns of amino acid replacement in mitochondrial genomes of mammals and birds.
Nabholz B; Uwimana N; Lartillot N
Genome Biol Evol; 2013; 5(7):1273-90. PubMed ID: 23711670
[TBL] [Abstract][Full Text] [Related]
13. Mixture models of nucleotide sequence evolution that account for heterogeneity in the substitution process across sites and across lineages.
Jayaswal V; Wong TK; Robinson J; Poladian L; Jermiin LS
Syst Biol; 2014 Sep; 63(5):726-42. PubMed ID: 24927722
[TBL] [Abstract][Full Text] [Related]
14. Small fitness effect of mutations in highly conserved non-coding regions.
Kryukov GV; Schmidt S; Sunyaev S
Hum Mol Genet; 2005 Aug; 14(15):2221-9. PubMed ID: 15994173
[TBL] [Abstract][Full Text] [Related]
15. Conservation and evolution of (CT)n/(GA)n microsatellite sequences at orthologous positions in diverse mammalian genomes.
Stallings RL
Genomics; 1995 Jan; 25(1):107-13. PubMed ID: 7774907
[TBL] [Abstract][Full Text] [Related]
16. Multiple evolutionary rate classes in animal genome evolution.
Oldmeadow C; Mengersen K; Mattick JS; Keith JM
Mol Biol Evol; 2010 Apr; 27(4):942-53. PubMed ID: 19955480
[TBL] [Abstract][Full Text] [Related]
17. Correlates of substitution rate variation in mammalian protein-coding sequences.
Welch JJ; Bininda-Emonds OR; Bromham L
BMC Evol Biol; 2008 Feb; 8():53. PubMed ID: 18284663
[TBL] [Abstract][Full Text] [Related]
18. Vestige: maximum likelihood phylogenetic footprinting.
Wakefield MJ; Maxwell P; Huttley GA
BMC Bioinformatics; 2005 May; 6():130. PubMed ID: 15921531
[TBL] [Abstract][Full Text] [Related]
19. Evolutionary history of mammalian transposons determined by genome-wide defragmentation.
Giordano J; Ge Y; Gelfand Y; Abrusán G; Benson G; Warburton PE
PLoS Comput Biol; 2007 Jul; 3(7):e137. PubMed ID: 17630829
[TBL] [Abstract][Full Text] [Related]
20. Evolutionary conservation and selection of human disease gene orthologs in the rat and mouse genomes.
Huang H; Winter EE; Wang H; Weinstock KG; Xing H; Goodstadt L; Stenson PD; Cooper DN; Smith D; Albà MM; Ponting CP; Fechtel K
Genome Biol; 2004; 5(7):R47. PubMed ID: 15239832
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]