224 related articles for article (PubMed ID: 19429599)
41. EigenTHREADER: analogous protein fold recognition by efficient contact map threading.
Buchan DWA; Jones DT
Bioinformatics; 2017 Sep; 33(17):2684-2690. PubMed ID: 28419258
[TBL] [Abstract][Full Text] [Related]
42. Improvement of the GenTHREADER method for genomic fold recognition.
McGuffin LJ; Jones DT
Bioinformatics; 2003 May; 19(7):874-81. PubMed ID: 12724298
[TBL] [Abstract][Full Text] [Related]
43. Learned random-walk kernels and empirical-map kernels for protein sequence classification.
Min R; Bonner A; Li J; Zhang Z
J Comput Biol; 2009 Mar; 16(3):457-74. PubMed ID: 19254184
[TBL] [Abstract][Full Text] [Related]
44. A discriminative method for protein remote homology detection and fold recognition combining Top-n-grams and latent semantic analysis.
Liu B; Wang X; Lin L; Dong Q; Wang X
BMC Bioinformatics; 2008 Dec; 9():510. PubMed ID: 19046430
[TBL] [Abstract][Full Text] [Related]
45. Protein tertiary structure prediction.
Xu D; Xu Y
Curr Protoc Protein Sci; 2001 May; Chapter 2():Unit2.7. PubMed ID: 18429154
[TBL] [Abstract][Full Text] [Related]
46. The MULTICOM toolbox for protein structure prediction.
Cheng J; Li J; Wang Z; Eickholt J; Deng X
BMC Bioinformatics; 2012 Apr; 13():65. PubMed ID: 22545707
[TBL] [Abstract][Full Text] [Related]
47. Building multiclass classifiers for remote homology detection and fold recognition.
Rangwala H; Karypis G
BMC Bioinformatics; 2006 Oct; 7():455. PubMed ID: 17042943
[TBL] [Abstract][Full Text] [Related]
48. LipocalinPred: a SVM-based method for prediction of lipocalins.
Ramana J; Gupta D
BMC Bioinformatics; 2009 Dec; 10():445. PubMed ID: 20030857
[TBL] [Abstract][Full Text] [Related]
49. Recent Progress in Machine Learning-Based Methods for Protein Fold Recognition.
Wei L; Zou Q
Int J Mol Sci; 2016 Dec; 17(12):. PubMed ID: 27999256
[TBL] [Abstract][Full Text] [Related]
50. ReFold-MAP: Protein remote homology detection and fold recognition based on features extracted from profiles.
Guo Y; Yan K; Wu H; Liu B
Anal Biochem; 2020 Dec; 611():114013. PubMed ID: 33160906
[TBL] [Abstract][Full Text] [Related]
51. Genomic scale sub-family assignment of protein domains.
Gough J
Nucleic Acids Res; 2006; 34(13):3625-33. PubMed ID: 16877569
[TBL] [Abstract][Full Text] [Related]
52. Improving contact prediction along three dimensions.
Feinauer C; Skwark MJ; Pagnani A; Aurell E
PLoS Comput Biol; 2014 Oct; 10(10):e1003847. PubMed ID: 25299132
[TBL] [Abstract][Full Text] [Related]
53. End-to-End Differentiable Learning of Protein Structure.
AlQuraishi M
Cell Syst; 2019 Apr; 8(4):292-301.e3. PubMed ID: 31005579
[TBL] [Abstract][Full Text] [Related]
54. Detecting evolutionary relationships across existing fold space, using sequence order-independent profile-profile alignments.
Xie L; Bourne PE
Proc Natl Acad Sci U S A; 2008 Apr; 105(14):5441-6. PubMed ID: 18385384
[TBL] [Abstract][Full Text] [Related]
55. Classification of protein folds.
Russell RB
Mol Biotechnol; 2007 Jul; 36(3):238-47. PubMed ID: 17873410
[TBL] [Abstract][Full Text] [Related]
56. Measuring the functional sequence complexity of proteins.
Durston KK; Chiu DK; Abel DL; Trevors JT
Theor Biol Med Model; 2007 Dec; 4():47. PubMed ID: 18062814
[TBL] [Abstract][Full Text] [Related]
57. Introduction to structural bioinformatics.
Xu Q; Dai H; Zhao T; Wei D
Adv Exp Med Biol; 2015; 827():1-7. PubMed ID: 25387955
[TBL] [Abstract][Full Text] [Related]
58. Protein structure and folding pathway prediction based on remote homologs recognition using PAthreader.
Zhao K; Xia Y; Zhang F; Zhou X; Li SZ; Zhang G
Commun Biol; 2023 Mar; 6(1):243. PubMed ID: 36871126
[TBL] [Abstract][Full Text] [Related]
59. FFAS-3D: improving fold recognition by including optimized structural features and template re-ranking.
Xu D; Jaroszewski L; Li Z; Godzik A
Bioinformatics; 2014 Mar; 30(5):660-7. PubMed ID: 24130308
[TBL] [Abstract][Full Text] [Related]
60. Gapped BLAST and PSI-BLAST: a new generation of protein database search programs.
Altschul SF; Madden TL; Schäffer AA; Zhang J; Zhang Z; Miller W; Lipman DJ
Nucleic Acids Res; 1997 Sep; 25(17):3389-402. PubMed ID: 9254694
[TBL] [Abstract][Full Text] [Related]
[Previous] [Next] [New Search]
