These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

243 related articles for article (PubMed ID: 19435513)

  • 1. Measuring differential gene expression by short read sequencing: quantitative comparison to 2-channel gene expression microarrays.
    Bloom JS; Khan Z; Kruglyak L; Singh M; Caudy AA
    BMC Genomics; 2009 May; 10():221. PubMed ID: 19435513
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Transcriptome sequencing of the Microarray Quality Control (MAQC) RNA reference samples using next generation sequencing.
    Mane SP; Evans C; Cooper KL; Crasta OR; Folkerts O; Hutchison SK; Harkins TT; Thierry-Mieg D; Thierry-Mieg J; Jensen RV
    BMC Genomics; 2009 Jun; 10():264. PubMed ID: 19523228
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Simultaneous genotyping, gene-expression measurement, and detection of allele-specific expression with oligonucleotide arrays.
    Ronald J; Akey JM; Whittle J; Smith EN; Yvert G; Kruglyak L
    Genome Res; 2005 Feb; 15(2):284-91. PubMed ID: 15687292
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Concordance among digital gene expression, microarrays, and qPCR when measuring differential expression of microRNAs.
    Pradervand S; Weber J; Lemoine F; Consales F; Paillusson A; Dupasquier M; Thomas J; Richter H; Kaessmann H; Beaudoing E; Hagenbüchle O; Harshman K
    Biotechniques; 2010 Mar; 48(3):219-22. PubMed ID: 20359303
    [TBL] [Abstract][Full Text] [Related]  

  • 5. High-density tiling microarray analysis of the full transcriptional activity of yeast.
    David L; Clauder-Münster S; Steinmetz LM
    Methods Mol Biol; 2014; 1205():257-73. PubMed ID: 25213250
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Exploratory differential gene expression analysis in microarray experiments with no or limited replication.
    Loguinov AV; Mian IS; Vulpe CD
    Genome Biol; 2004; 5(3):R18. PubMed ID: 15003121
    [TBL] [Abstract][Full Text] [Related]  

  • 7. A nested parallel experiment demonstrates differences in intensity-dependence between RNA-seq and microarrays.
    Robinson DG; Wang JY; Storey JD
    Nucleic Acids Res; 2015 Nov; 43(20):e131. PubMed ID: 26130709
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Selection of long oligonucleotides for gene expression microarrays using weighted rank-sum strategy.
    Hu G; Llinás M; Li J; Preiser PR; Bozdech Z
    BMC Bioinformatics; 2007 Sep; 8():350. PubMed ID: 17880708
    [TBL] [Abstract][Full Text] [Related]  

  • 9. A rapid and inexpensive labeling method for microarray gene expression analysis.
    Ouellet M; Adams PD; Keasling JD; Mukhopadhyay A
    BMC Biotechnol; 2009 Nov; 9():97. PubMed ID: 19939278
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Optimization of cDNA microarray experimental designs using an evolutionary algorithm.
    Gondro C; Kinghorn BP
    IEEE/ACM Trans Comput Biol Bioinform; 2008; 5(4):630-8. PubMed ID: 18989048
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Comparison of hybridization-based and sequencing-based gene expression technologies on biological replicates.
    Liu F; Jenssen TK; Trimarchi J; Punzo C; Cepko CL; Ohno-Machado L; Hovig E; Kuo WP
    BMC Genomics; 2007 Jun; 8():153. PubMed ID: 17555589
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Development of anonymous cDNA microarrays to study changes to the Senecio floral transcriptome during hybrid speciation.
    Hegarty MJ; Jones JM; Wilson ID; Barker GL; Coghill JA; Sanchez-Baracaldo P; Liu G; Buggs RJ; Abbott RJ; Edwards KJ; Hiscock SJ
    Mol Ecol; 2005 Jul; 14(8):2493-510. PubMed ID: 15969730
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Efficient yeast ChIP-Seq using multiplex short-read DNA sequencing.
    Lefrançois P; Euskirchen GM; Auerbach RK; Rozowsky J; Gibson T; Yellman CM; Gerstein M; Snyder M
    BMC Genomics; 2009 Jan; 10():37. PubMed ID: 19159457
    [TBL] [Abstract][Full Text] [Related]  

  • 14. UNAGI: an automated pipeline for nanopore full-length cDNA sequencing uncovers novel transcripts and isoforms in yeast.
    Al Kadi M; Jung N; Ito S; Kameoka S; Hishida T; Motooka D; Nakamura S; Iida T; Okuzaki D
    Funct Integr Genomics; 2020 Jul; 20(4):523-536. PubMed ID: 31955296
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Quantification of the yeast transcriptome by single-molecule sequencing.
    Lipson D; Raz T; Kieu A; Jones DR; Giladi E; Thayer E; Thompson JF; Letovsky S; Milos P; Causey M
    Nat Biotechnol; 2009 Jul; 27(7):652-8. PubMed ID: 19581875
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Deep sequencing-based expression analysis shows major advances in robustness, resolution and inter-lab portability over five microarray platforms.
    't Hoen PA; Ariyurek Y; Thygesen HH; Vreugdenhil E; Vossen RH; de Menezes RX; Boer JM; van Ommen GJ; den Dunnen JT
    Nucleic Acids Res; 2008 Dec; 36(21):e141. PubMed ID: 18927111
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Expression profiling of the bottom fermenting yeast Saccharomyces pastorianus orthologous genes using oligonucleotide microarrays.
    Minato T; Yoshida S; Ishiguro T; Shimada E; Mizutani S; Kobayashi O; Yoshimoto H
    Yeast; 2009 Mar; 26(3):147-65. PubMed ID: 19243081
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Genome-wide transcriptome analysis in yeast using high-density tiling arrays.
    David L; Clauder-Münster S; Steinmetz LM
    Methods Mol Biol; 2011; 759():107-23. PubMed ID: 21863484
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Analysis of DNA strand-specific differential expression with high density tiling microarrays.
    Quintales L; Sánchez M; Antequera F
    BMC Bioinformatics; 2010 Mar; 11():136. PubMed ID: 20233458
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Quantitative comparison of cDNA-AFLP, microarrays, and GeneChip expression data in Saccharomyces cerevisiae.
    Reijans M; Lascaris R; Groeneger AO; Wittenberg A; Wesselink E; van Oeveren J; de Wit E; Boorsma A; Voetdijk B; van der Spek H; Grivell LA; Simons G
    Genomics; 2003 Dec; 82(6):606-18. PubMed ID: 14611802
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 13.