172 related articles for article (PubMed ID: 19508201)
1. Annotation of non-synonymous single polymorphisms in human liver proteome by mass spectrometry.
Chen M; Yang B; Ying W; He F; Qian X
Protein Pept Lett; 2010 Mar; 17(3):277-86. PubMed ID: 19508201
[TBL] [Abstract][Full Text] [Related]
2. DISMS2: A flexible algorithm for direct proteome- wide distance calculation of LC-MS/MS runs.
Rieder V; Blank-Landeshammer B; Stuhr M; Schell T; Biß K; Kollipara L; Meyer A; Pfenninger M; Westphal H; Sickmann A; Rahnenführer J
BMC Bioinformatics; 2017 Mar; 18(1):148. PubMed ID: 28253837
[TBL] [Abstract][Full Text] [Related]
3. Detection and validation of non-synonymous coding SNPs from orthogonal analysis of shotgun proteomics data.
Bunger MK; Cargile BJ; Sevinsky JR; Deyanova E; Yates NA; Hendrickson RC; Stephenson JL
J Proteome Res; 2007 Jun; 6(6):2331-40. PubMed ID: 17488105
[TBL] [Abstract][Full Text] [Related]
4. Analysis of human liver proteome using replicate shotgun strategy.
Chen M; Ying W; Song Y; Liu X; Yang B; Wu S; Jiang Y; Cai Y; He F; Qian X
Proteomics; 2007 Jul; 7(14):2479-88. PubMed ID: 17623305
[TBL] [Abstract][Full Text] [Related]
5. Mass Spectrometry-Based Proteomics.
Di Falco MR
Methods Mol Biol; 2018; 1775():93-106. PubMed ID: 29876812
[TBL] [Abstract][Full Text] [Related]
6. Integrated solid-phase extraction-capillary liquid chromatography (speLC) interfaced to ESI-MS/MS for fast characterization and quantification of protein and proteomes.
Falkenby LG; Such-Sanmartín G; Larsen MR; Vorm O; Bache N; Jensen ON
J Proteome Res; 2014 Dec; 13(12):6169-75. PubMed ID: 25277625
[TBL] [Abstract][Full Text] [Related]
7. Identification of novel alternative splicing biomarkers for breast cancer with LC/MS/MS and RNA-Seq.
Zhang F; Deng CK; Wang M; Deng B; Barber R; Huang G
BMC Bioinformatics; 2020 Dec; 21(Suppl 9):541. PubMed ID: 33272210
[TBL] [Abstract][Full Text] [Related]
8. Chromosome-Based Proteomic Study for Identifying Novel Protein Variants from Human Hippocampal Tissue Using Customized neXtProt and GENCODE Databases.
Hwang H; Park GW; Kim KH; Lee JY; Lee HK; Ji ES; Park SK; Xu T; Yates JR; Kwon KH; Park YM; Lee HJ; Paik YK; Kim JY; Yoo JS
J Proteome Res; 2015 Dec; 14(12):5028-37. PubMed ID: 26549206
[TBL] [Abstract][Full Text] [Related]
9. Proteome-wide onco-proteogenomic somatic variant identification in ER-positive breast cancer.
Dimitrakopoulos L; Prassas I; Sieuwerts AM; Diamandis EP; Martens JWM; Charames GS
Clin Biochem; 2019 Apr; 66():63-75. PubMed ID: 30684468
[TBL] [Abstract][Full Text] [Related]
10. Comparison of CE-MS/MS and LC-MS/MS sequencing demonstrates significant complementarity in natural peptide identification in human urine.
Klein J; Papadopoulos T; Mischak H; Mullen W
Electrophoresis; 2014 Apr; 35(7):1060-4. PubMed ID: 24254231
[TBL] [Abstract][Full Text] [Related]
11. Quality control of single amino acid variations detected by tandem mass spectrometry.
Yi X; Wang B; An Z; Gong F; Li J; Fu Y
J Proteomics; 2018 Sep; 187():144-151. PubMed ID: 30012419
[TBL] [Abstract][Full Text] [Related]
12. XMAn: a Homo sapiens mutated-peptide database for the MS analysis of cancerous cell states.
Yang X; Lazar IM
J Proteome Res; 2014 Dec; 13(12):5486-95. PubMed ID: 25211293
[TBL] [Abstract][Full Text] [Related]
13. AP3: An Advanced Proteotypic Peptide Predictor for Targeted Proteomics by Incorporating Peptide Digestibility.
Gao Z; Chang C; Yang J; Zhu Y; Fu Y
Anal Chem; 2019 Jul; 91(13):8705-8711. PubMed ID: 31247716
[TBL] [Abstract][Full Text] [Related]
14. Enhanced characterization of complex proteomic samples using LC-MALDI MS/MS: exclusion of redundant peptides from MS/MS analysis in replicate runs.
Chen HS; Rejtar T; Andreev V; Moskovets E; Karger BL
Anal Chem; 2005 Dec; 77(23):7816-25. PubMed ID: 16316193
[TBL] [Abstract][Full Text] [Related]
15. Algorithms for the de novo sequencing of peptides from tandem mass spectra.
Allmer J
Expert Rev Proteomics; 2011 Oct; 8(5):645-57. PubMed ID: 21999834
[TBL] [Abstract][Full Text] [Related]
16. Assessing Protein Sequence Database Suitability Using
Johnson RS; Searle BC; Nunn BL; Gilmore JM; Phillips M; Amemiya CT; Heck M; MacCoss MJ
Mol Cell Proteomics; 2020 Jan; 19(1):198-208. PubMed ID: 31732549
[TBL] [Abstract][Full Text] [Related]
17. YPED: an integrated bioinformatics suite and database for mass spectrometry-based proteomics research.
Colangelo CM; Shifman M; Cheung KH; Stone KL; Carriero NJ; Gulcicek EE; Lam TT; Wu T; Bjornson RD; Bruce C; Nairn AC; Rinehart J; Miller PL; Williams KR
Genomics Proteomics Bioinformatics; 2015 Feb; 13(1):25-35. PubMed ID: 25712262
[TBL] [Abstract][Full Text] [Related]
18. Screening of missing proteins in the human liver proteome by improved MRM-approach-based targeted proteomics.
Chen C; Liu X; Zheng W; Zhang L; Yao J; Yang P
J Proteome Res; 2014 Apr; 13(4):1969-78. PubMed ID: 24597967
[TBL] [Abstract][Full Text] [Related]
19. A draft map of rhesus monkey tissue proteome for biomedical research.
Lee JG; McKinney KQ; Lee YY; Chung HN; Pavlopoulos AJ; Jung KY; Kim WK; Kuroda MJ; Han DK; Hwang S
PLoS One; 2015; 10(5):e0126243. PubMed ID: 25974132
[TBL] [Abstract][Full Text] [Related]
20. Combining De Novo Peptide Sequencing Algorithms, A Synergistic Approach to Boost Both Identifications and Confidence in Bottom-up Proteomics.
Blank-Landeshammer B; Kollipara L; Biß K; Pfenninger M; Malchow S; Shuvaev K; Zahedi RP; Sickmann A
J Proteome Res; 2017 Sep; 16(9):3209-3218. PubMed ID: 28741358
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
