154 related articles for article (PubMed ID: 19508202)
1. Improve the prediction of RNA-binding residues using structural neighbours.
Li Q; Cao Z; Liu H
Protein Pept Lett; 2010 Mar; 17(3):287-96. PubMed ID: 19508202
[TBL] [Abstract][Full Text] [Related]
2. SVM based prediction of RNA-binding proteins using binding residues and evolutionary information.
Kumar M; Gromiha MM; Raghava GP
J Mol Recognit; 2011; 24(2):303-13. PubMed ID: 20677174
[TBL] [Abstract][Full Text] [Related]
3. Prediction of RNA-binding residues in proteins from primary sequence using an enriched random forest model with a novel hybrid feature.
Ma X; Guo J; Wu J; Liu H; Yu J; Xie J; Sun X
Proteins; 2011 Apr; 79(4):1230-9. PubMed ID: 21268114
[TBL] [Abstract][Full Text] [Related]
4. Analysis and prediction of RNA-binding residues using sequence, evolutionary conservation, and predicted secondary structure and solvent accessibility.
Zhang T; Zhang H; Chen K; Ruan J; Shen S; Kurgan L
Curr Protein Pept Sci; 2010 Nov; 11(7):609-28. PubMed ID: 20887256
[TBL] [Abstract][Full Text] [Related]
5. Prediction of RNA binding sites in a protein using SVM and PSSM profile.
Kumar M; Gromiha MM; Raghava GP
Proteins; 2008 Apr; 71(1):189-94. PubMed ID: 17932917
[TBL] [Abstract][Full Text] [Related]
6. Prediction of protein-RNA binding sites by a random forest method with combined features.
Liu ZP; Wu LY; Wang Y; Zhang XS; Chen L
Bioinformatics; 2010 Jul; 26(13):1616-22. PubMed ID: 20483814
[TBL] [Abstract][Full Text] [Related]
7. Computational Prediction of RNA-Binding Proteins and Binding Sites.
Si J; Cui J; Cheng J; Wu R
Int J Mol Sci; 2015 Nov; 16(11):26303-17. PubMed ID: 26540053
[TBL] [Abstract][Full Text] [Related]
8. Predicting RNA-binding residues from evolutionary information and sequence conservation.
Huang YF; Chiu LY; Huang CC; Huang CK
BMC Genomics; 2010 Dec; 11 Suppl 4(Suppl 4):S2. PubMed ID: 21143803
[TBL] [Abstract][Full Text] [Related]
9. Identification of RNA-binding sites in proteins by integrating various sequence information.
Wang CC; Fang Y; Xiao J; Li M
Amino Acids; 2011 Jan; 40(1):239-48. PubMed ID: 20549269
[TBL] [Abstract][Full Text] [Related]
10. Protein-RNA interface residue prediction using machine learning: an assessment of the state of the art.
Walia RR; Caragea C; Lewis BA; Towfic F; Terribilini M; El-Manzalawy Y; Dobbs D; Honavar V
BMC Bioinformatics; 2012 May; 13():89. PubMed ID: 22574904
[TBL] [Abstract][Full Text] [Related]
11. Sequence-based prediction of DNA-binding residues in proteins with conservation and correlation information.
Ma X; Guo J; Liu HD; Xie JM; Sun X
IEEE/ACM Trans Comput Biol Bioinform; 2012; 9(6):1766-75. PubMed ID: 22868682
[TBL] [Abstract][Full Text] [Related]
12. Comprehensive review and empirical analysis of hallmarks of DNA-, RNA- and protein-binding residues in protein chains.
Zhang J; Ma Z; Kurgan L
Brief Bioinform; 2019 Jul; 20(4):1250-1268. PubMed ID: 29253082
[TBL] [Abstract][Full Text] [Related]
13. Prediction of mono- and di-nucleotide-specific DNA-binding sites in proteins using neural networks.
Andrabi M; Mizuguchi K; Sarai A; Ahmad S
BMC Struct Biol; 2009 May; 9():30. PubMed ID: 19439068
[TBL] [Abstract][Full Text] [Related]
14. A MOTIF-BASED METHOD FOR PREDICTING INTERFACIAL RESIDUES IN BOTH THE RNA AND PROTEIN COMPONENTS OF PROTEIN-RNA COMPLEXES.
Muppirala U; Lewis BA; Mann CM; Dobbs D
Pac Symp Biocomput; 2016; 21():445-455. PubMed ID: 26776208
[TBL] [Abstract][Full Text] [Related]
15. De novo prediction of RNA-protein interactions from sequence information.
Wang Y; Chen X; Liu ZP; Huang Q; Wang Y; Xu D; Zhang XS; Chen R; Chen L
Mol Biosyst; 2013 Jan; 9(1):133-42. PubMed ID: 23138266
[TBL] [Abstract][Full Text] [Related]
16. PRBP: Prediction of RNA-Binding Proteins Using a Random Forest Algorithm Combined with an RNA-Binding Residue Predictor.
Ma X; Guo J; Xiao K; Sun X
IEEE/ACM Trans Comput Biol Bioinform; 2015; 12(6):1385-93. PubMed ID: 26671809
[TBL] [Abstract][Full Text] [Related]
17. econvRBP: Improved ensemble convolutional neural networks for RNA binding protein prediction directly from sequence.
Zhao Y; Du X
Methods; 2020 Oct; 181-182():15-23. PubMed ID: 31513916
[TBL] [Abstract][Full Text] [Related]
18. Structure-based prediction of protein- peptide binding regions using Random Forest.
Taherzadeh G; Zhou Y; Liew AW; Yang Y
Bioinformatics; 2018 Feb; 34(3):477-484. PubMed ID: 29028926
[TBL] [Abstract][Full Text] [Related]
19. Accurate prediction of RNA-binding protein residues with two discriminative structural descriptors.
Sun M; Wang X; Zou C; He Z; Liu W; Li H
BMC Bioinformatics; 2016 Jun; 17(1):231. PubMed ID: 27266516
[TBL] [Abstract][Full Text] [Related]
20. RBRIdent: An algorithm for improved identification of RNA-binding residues in proteins from primary sequences.
Xiong D; Zeng J; Gong H
Proteins; 2015 Jun; 83(6):1068-77. PubMed ID: 25846271
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
