These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

165 related articles for article (PubMed ID: 19508732)

  • 1. Local alignment of two-base encoded DNA sequence.
    Homer N; Merriman B; Nelson SF
    BMC Bioinformatics; 2009 Jun; 10():175. PubMed ID: 19508732
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Local alignment of generalized k-base encoded DNA sequence.
    Homer N; Nelson SF; Merriman B
    BMC Bioinformatics; 2010 Jun; 11():347. PubMed ID: 20576157
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Glocal alignment: finding rearrangements during alignment.
    Brudno M; Malde S; Poliakov A; Do CB; Couronne O; Dubchak I; Batzoglou S
    Bioinformatics; 2003; 19 Suppl 1():i54-62. PubMed ID: 12855437
    [TBL] [Abstract][Full Text] [Related]  

  • 4. The tree alignment problem.
    Varón A; Wheeler WC
    BMC Bioinformatics; 2012 Nov; 13():293. PubMed ID: 23140486
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Pairwise alignment of nucleotide sequences using maximal exact matches.
    Bayat A; Gaëta B; Ignjatovic A; Parameswaran S
    BMC Bioinformatics; 2019 May; 20(1):261. PubMed ID: 31113356
    [TBL] [Abstract][Full Text] [Related]  

  • 6. CSA: an efficient algorithm to improve circular DNA multiple alignment.
    Fernandes F; Pereira L; Freitas AT
    BMC Bioinformatics; 2009 Jul; 10():230. PubMed ID: 19627599
    [TBL] [Abstract][Full Text] [Related]  

  • 7. FOGSAA: Fast Optimal Global Sequence Alignment Algorithm.
    Chakraborty A; Bandyopadhyay S
    Sci Rep; 2013; 3():1746. PubMed ID: 23624407
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Iterative refinement of structure-based sequence alignments by Seed Extension.
    Kim C; Tai CH; Lee B
    BMC Bioinformatics; 2009 Jul; 10():210. PubMed ID: 19589133
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Lower bounds on multiple sequence alignment using exact 3-way alignment.
    Colbourn CJ; Kumar S
    BMC Bioinformatics; 2007 Apr; 8():140. PubMed ID: 17470273
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Highly improved homopolymer aware nucleotide-protein alignments with 454 data.
    Lysholm F
    BMC Bioinformatics; 2012 Sep; 13():230. PubMed ID: 22971057
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Alignment of biological sequences with quality scores.
    Na JC; Roh K; Apostolico A; Park K
    Int J Bioinform Res Appl; 2009; 5(1):97-113. PubMed ID: 19136367
    [TBL] [Abstract][Full Text] [Related]  

  • 12. ABS: Sequence alignment by scanning.
    Bonny T; Salama KN
    Annu Int Conf IEEE Eng Med Biol Soc; 2011; 2011():928-31. PubMed ID: 22254463
    [TBL] [Abstract][Full Text] [Related]  

  • 13. A RAPID algorithm for sequence database comparisons: application to the identification of vector contamination in the EMBL databases.
    Miller C; Gurd J; Brass A
    Bioinformatics; 1999 Feb; 15(2):111-21. PubMed ID: 10089196
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Space-conserving optimal DNA-protein alignment.
    Ko P; Narayanan M; Kalyanaraman A; Aluru S
    Proc IEEE Comput Syst Bioinform Conf; 2004; ():80-8. PubMed ID: 16448002
    [TBL] [Abstract][Full Text] [Related]  

  • 15. The effect of sequence quality on sequence alignment.
    Malde K
    Bioinformatics; 2008 Apr; 24(7):897-900. PubMed ID: 18296747
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Heuristic reusable dynamic programming: efficient updates of local sequence alignment.
    Hong C; Tewfik AH
    IEEE/ACM Trans Comput Biol Bioinform; 2009; 6(4):570-82. PubMed ID: 19875856
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Logarithmic gap costs decrease alignment accuracy.
    Cartwright RA
    BMC Bioinformatics; 2006 Dec; 7():527. PubMed ID: 17147805
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Sigma: multiple alignment of weakly-conserved non-coding DNA sequence.
    Siddharthan R
    BMC Bioinformatics; 2006 Mar; 7():143. PubMed ID: 16542424
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Alignments of DNA and protein sequences containing frameshift errors.
    Guan X; Uberbacher EC
    Comput Appl Biosci; 1996 Feb; 12(1):31-40. PubMed ID: 8670617
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Exact and complete short-read alignment to microbial genomes using Graphics Processing Unit programming.
    Blom J; Jakobi T; Doppmeier D; Jaenicke S; Kalinowski J; Stoye J; Goesmann A
    Bioinformatics; 2011 May; 27(10):1351-8. PubMed ID: 21450712
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 9.