112 related articles for article (PubMed ID: 19558651)
21. Most partial domains in proteins are alignment and annotation artifacts.
Triant DA; Pearson WR
Genome Biol; 2015 May; 16(1):99. PubMed ID: 25976240
[TBL] [Abstract][Full Text] [Related]
22. Exploring protein structural dissimilarity to facilitate structure classification.
Jain P; Hirst JD
BMC Struct Biol; 2009 Sep; 9():60. PubMed ID: 19765314
[TBL] [Abstract][Full Text] [Related]
23. PPT-DB: the protein property prediction and testing database.
Wishart DS; Arndt D; Berjanskii M; Guo AC; Shi Y; Shrivastava S; Zhou J; Zhou Y; Lin G
Nucleic Acids Res; 2008 Jan; 36(Database issue):D222-9. PubMed ID: 17916570
[TBL] [Abstract][Full Text] [Related]
24. Improving AlphaFold predicted contacts in alpha-helical transmembrane proteins structures using structural features.
Sawhney A; Li J; Liao L
Res Sq; 2023 Oct; ():. PubMed ID: 37961476
[TBL] [Abstract][Full Text] [Related]
25. Systematic evaluation of computational tools to predict the effects of mutations on protein stability in the absence of experimental structures.
Pan Q; Nguyen TB; Ascher DB; Pires DEV
Brief Bioinform; 2022 Mar; 23(2):. PubMed ID: 35189634
[TBL] [Abstract][Full Text] [Related]
26. Machine learning-based prediction of proteins' architecture using sequences of amino acids and structural alphabets.
Abbass J; Parisi C
J Biomol Struct Dyn; 2024 Mar; ():1-16. PubMed ID: 38505995
[TBL] [Abstract][Full Text] [Related]
27. NNvPDB: Neural Network based Protein Secondary Structure Prediction with PDB Validation.
Sakthivel S; S K M H
Bioinformation; 2015; 11(8):416-21. PubMed ID: 26420924
[TBL] [Abstract][Full Text] [Related]
28. A tool for the prediction of functionally important sites in proteins using a library of functional templates.
Lanczycki CJ; Chakrabarti S
Bioinformation; 2008 Feb; 2(7):279-83. PubMed ID: 18478080
[TBL] [Abstract][Full Text] [Related]
29. A protein sequence meta-functional signature for calcium binding residue prediction.
Horst JA; Samudrala R
Pattern Recognit Lett; 2010 Oct; 31(14):2103-2112. PubMed ID: 20824111
[TBL] [Abstract][Full Text] [Related]
30. An algorithm to parse segment packing in predicted protein contact maps.
Taylor WR
Algorithms Mol Biol; 2016; 11():17. PubMed ID: 27330543
[TBL] [Abstract][Full Text] [Related]
31. Prediction of Organic Reaction Outcomes Using Machine Learning.
Coley CW; Barzilay R; Jaakkola TS; Green WH; Jensen KF
ACS Cent Sci; 2017 May; 3(5):434-443. PubMed ID: 28573205
[TBL] [Abstract][Full Text] [Related]
32. Author disambiguation using multi-aspect similarity indicators.
Gurney T; Horlings E; van den Besselaar P
Scientometrics; 2012 May; 91(2):435-449. PubMed ID: 22485059
[TBL] [Abstract][Full Text] [Related]
33. Accurate Ab Initio and Template-Based Prediction of Short Intrinsically-Disordered Regions by Bidirectional Recurrent Neural Networks Trained on Large-Scale Datasets.
Volpato V; Alshomrani B; Pollastri G
Int J Mol Sci; 2015 Aug; 16(8):19868-85. PubMed ID: 26307973
[TBL] [Abstract][Full Text] [Related]
34. Protein inter-domain linker prediction using Random Forest and amino acid physiochemical properties.
Shatnawi M; Zaki N; Yoo PD
BMC Bioinformatics; 2014; 15 Suppl 16(Suppl 16):S8. PubMed ID: 25521329
[TBL] [Abstract][Full Text] [Related]
35. Comprehensive repertoire of foldable regions within whole genomes.
Faure G; Callebaut I
PLoS Comput Biol; 2013 Oct; 9(10):e1003280. PubMed ID: 24204229
[TBL] [Abstract][Full Text] [Related]
36. SCLpredT: Ab initio and homology-based prediction of subcellular localization by N-to-1 neural networks.
Adelfio A; Volpato V; Pollastri G
Springerplus; 2013; 2():502. PubMed ID: 24133649
[TBL] [Abstract][Full Text] [Related]
37. DomHR: accurately identifying domain boundaries in proteins using a hinge region strategy.
Zhang XY; Lu LJ; Song Q; Yang QQ; Li DP; Sun JM; Li TH; Cong PS
PLoS One; 2013; 8(4):e60559. PubMed ID: 23593247
[TBL] [Abstract][Full Text] [Related]
38. Prediction of protein domain with mRMR feature selection and analysis.
Li BQ; Hu LL; Chen L; Feng KY; Cai YD; Chou KC
PLoS One; 2012; 7(6):e39308. PubMed ID: 22720092
[TBL] [Abstract][Full Text] [Related]
39. DoBo: Protein domain boundary prediction by integrating evolutionary signals and machine learning.
Eickholt J; Deng X; Cheng J
BMC Bioinformatics; 2011 Feb; 12():43. PubMed ID: 21284866
[TBL] [Abstract][Full Text] [Related]
40. Ab initio and homology based prediction of protein domains by recursive neural networks.
Walsh I; Martin AJ; Mooney C; Rubagotti E; Vullo A; Pollastri G
BMC Bioinformatics; 2009 Jun; 10():195. PubMed ID: 19558651
[TBL] [Abstract][Full Text] [Related]
[Previous] [Next] [New Search]