204 related articles for article (PubMed ID: 19571241)
1. Gene and genome trees conflict at many levels.
Haggerty LS; Martin FJ; Fitzpatrick DA; McInerney JO
Philos Trans R Soc Lond B Biol Sci; 2009 Aug; 364(1527):2209-19. PubMed ID: 19571241
[TBL] [Abstract][Full Text] [Related]
2. Does a tree-like phylogeny only exist at the tips in the prokaryotes?
Creevey CJ; Fitzpatrick DA; Philip GK; Kinsella RJ; O'Connell MJ; Pentony MM; Travers SA; Wilkinson M; McInerney JO
Proc Biol Sci; 2004 Dec; 271(1557):2551-8. PubMed ID: 15615680
[TBL] [Abstract][Full Text] [Related]
3. The power of phylogenetic approaches to detect horizontally transferred genes.
Poptsova MS; Gogarten JP
BMC Evol Biol; 2007 Mar; 7():45. PubMed ID: 17376230
[TBL] [Abstract][Full Text] [Related]
4. Genome trees constructed using five different approaches suggest new major bacterial clades.
Wolf YI; Rogozin IB; Grishin NV; Tatusov RL; Koonin EV
BMC Evol Biol; 2001 Oct; 1():8. PubMed ID: 11734060
[TBL] [Abstract][Full Text] [Related]
5. From phylogenetics to phylogenomics: the evolutionary relationships of insect endosymbiotic gamma-Proteobacteria as a test case.
Comas I; Moya A; González-Candelas F
Syst Biol; 2007 Feb; 56(1):1-16. PubMed ID: 17366133
[TBL] [Abstract][Full Text] [Related]
6. The ancestor of the Paulinella chromatophore obtained a carboxysomal operon by horizontal gene transfer from a Nitrococcus-like gamma-proteobacterium.
Marin B; Nowack EC; Glöckner G; Melkonian M
BMC Evol Biol; 2007 Jun; 7():85. PubMed ID: 17550603
[TBL] [Abstract][Full Text] [Related]
7. Gene cluster analysis method identifies horizontally transferred genes with high reliability and indicates that they provide the main mechanism of operon gain in 8 species of gamma-Proteobacteria.
Homma K; Fukuchi S; Nakamura Y; Gojobori T; Nishikawa K
Mol Biol Evol; 2007 Mar; 24(3):805-13. PubMed ID: 17185745
[TBL] [Abstract][Full Text] [Related]
8. Highways of gene sharing in prokaryotes.
Beiko RG; Harlow TJ; Ragan MA
Proc Natl Acad Sci U S A; 2005 Oct; 102(40):14332-7. PubMed ID: 16176988
[TBL] [Abstract][Full Text] [Related]
9. Phylogenetics and the cohesion of bacterial genomes.
Daubin V; Moran NA; Ochman H
Science; 2003 Aug; 301(5634):829-32. PubMed ID: 12907801
[TBL] [Abstract][Full Text] [Related]
10. Loss of genes for DNA recombination and repair in the reductive genome evolution of thioautotrophic symbionts of Calyptogena clams.
Kuwahara H; Takaki Y; Shimamura S; Yoshida T; Maeda T; Kunieda T; Maruyama T
BMC Evol Biol; 2011 Oct; 11():285. PubMed ID: 21966992
[TBL] [Abstract][Full Text] [Related]
11. Identical sequences found in distant genomes reveal frequent horizontal transfer across the bacterial domain.
Sheinman M; Arkhipova K; Arndt PF; Dutilh BE; Hermsen R; Massip F
Elife; 2021 Jun; 10():. PubMed ID: 34121661
[TBL] [Abstract][Full Text] [Related]
12. Phylogeny of gamma-proteobacteria: resolution of one branch of the universal tree?
Brown JR; Volker C
Bioessays; 2004 May; 26(5):463-8. PubMed ID: 15112225
[TBL] [Abstract][Full Text] [Related]
13. To tree or not to tree? Genome-wide quantification of recombination and reticulate evolution during the diversification of strict intracellular bacteria.
Hernández-López A; Chabrol O; Royer-Carenzi M; Merhej V; Pontarotti P; Raoult D
Genome Biol Evol; 2013; 5(12):2305-17. PubMed ID: 24259310
[TBL] [Abstract][Full Text] [Related]
14. Algorithms for computing parsimonious evolutionary scenarios for genome evolution, the last universal common ancestor and dominance of horizontal gene transfer in the evolution of prokaryotes.
Mirkin BG; Fenner TI; Galperin MY; Koonin EV
BMC Evol Biol; 2003 Jan; 3():2. PubMed ID: 12515582
[TBL] [Abstract][Full Text] [Related]
15. Quartet mapping and the extent of lateral transfer in bacterial genomes.
Daubin V; Ochman H
Mol Biol Evol; 2004 Jan; 21(1):86-9. PubMed ID: 12949130
[TBL] [Abstract][Full Text] [Related]
16. Comparative genomics of microbial pathogens and symbionts.
Andersson SG; Alsmark C; Canbäck B; Davids W; Frank C; Karlberg O; Klasson L; Antoine-Legault B; Mira A; Tamas I
Bioinformatics; 2002; 18 Suppl 2():S17. PubMed ID: 12385978
[TBL] [Abstract][Full Text] [Related]
17. Phylogenetic analysis of nitrite, nitric oxide, and nitrous oxide respiratory enzymes reveal a complex evolutionary history for denitrification.
Jones CM; Stres B; Rosenquist M; Hallin S
Mol Biol Evol; 2008 Sep; 25(9):1955-66. PubMed ID: 18614527
[TBL] [Abstract][Full Text] [Related]
18. From gene trees to organismal phylogeny in prokaryotes: the case of the gamma-Proteobacteria.
Lerat E; Daubin V; Moran NA
PLoS Biol; 2003 Oct; 1(1):E19. PubMed ID: 12975657
[TBL] [Abstract][Full Text] [Related]
19. The balance of driving forces during genome evolution in prokaryotes.
Kunin V; Ouzounis CA
Genome Res; 2003 Jul; 13(7):1589-94. PubMed ID: 12840037
[TBL] [Abstract][Full Text] [Related]
20. Evolution of the RNA polymerase B' subunit gene (rpoB') in Halobacteriales: a complementary molecular marker to the SSU rRNA gene.
Walsh DA; Bapteste E; Kamekura M; Doolittle WF
Mol Biol Evol; 2004 Dec; 21(12):2340-51. PubMed ID: 15356285
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
