240 related articles for article (PubMed ID: 19578405)
1. Clustering of codons with rare cognate tRNAs in human genes suggests an extra level of expression regulation.
Parmley JL; Huynen MA
PLoS Genet; 2009 Jul; 5(7):e1000548. PubMed ID: 19578405
[TBL] [Abstract][Full Text] [Related]
2. Coevolution of codon usage and transfer RNA abundance.
Bulmer M
Nature; 1987 Feb 19-25; 325(6106):728-30. PubMed ID: 2434856
[TBL] [Abstract][Full Text] [Related]
3. Evidence of multifaceted functions of codon usage in translation within the model beetle Tribolium castaneum.
Whittle CA; Kulkarni A; Extavour CG
DNA Res; 2019 Dec; 26(6):473-484. PubMed ID: 31922535
[TBL] [Abstract][Full Text] [Related]
4. Adaptation of codon and amino acid use for translational functions in highly expressed cricket genes.
Whittle CA; Kulkarni A; Chung N; Extavour CG
BMC Genomics; 2021 Apr; 22(1):234. PubMed ID: 33823803
[TBL] [Abstract][Full Text] [Related]
5. HIV-1 modulates the tRNA pool to improve translation efficiency.
van Weringh A; Ragonnet-Cronin M; Pranckeviciene E; Pavon-Eternod M; Kleiman L; Xia X
Mol Biol Evol; 2011 Jun; 28(6):1827-34. PubMed ID: 21216840
[TBL] [Abstract][Full Text] [Related]
6. Codon usage suggests that translational selection has a major impact on protein expression in trypanosomatids.
Horn D
BMC Genomics; 2008 Jan; 9():2. PubMed ID: 18173843
[TBL] [Abstract][Full Text] [Related]
7. The action of selection on codon bias in the human genome is related to frequency, complexity, and chronology of amino acids.
Kotlar D; Lavner Y
BMC Genomics; 2006 Apr; 7():67. PubMed ID: 16584540
[TBL] [Abstract][Full Text] [Related]
8. Codon bias as a factor in regulating expression via translation rate in the human genome.
Lavner Y; Kotlar D
Gene; 2005 Jan; 345(1):127-38. PubMed ID: 15716084
[TBL] [Abstract][Full Text] [Related]
9. Translational Selection for Speed Is Not Sufficient to Explain Variation in Bacterial Codon Usage Bias.
Mahajan S; Agashe D
Genome Biol Evol; 2018 Feb; 10(2):562-576. PubMed ID: 29385509
[TBL] [Abstract][Full Text] [Related]
10. Codon Usage Optimization in the Prokaryotic Tree of Life: How Synonymous Codons Are Differentially Selected in Sequence Domains with Different Expression Levels and Degrees of Conservation.
López JL; Lozano MJ; Fabre ML; Lagares A
mBio; 2020 Jul; 11(4):. PubMed ID: 32694138
[TBL] [Abstract][Full Text] [Related]
11. Tissue- and Time-Specific Expression of Otherwise Identical tRNA Genes.
Sagi D; Rak R; Gingold H; Adir I; Maayan G; Dahan O; Broday L; Pilpel Y; Rechavi O
PLoS Genet; 2016 Aug; 12(8):e1006264. PubMed ID: 27560950
[TBL] [Abstract][Full Text] [Related]
12. The combined influence of codon composition and tRNA copy number regulates translational efficiency by influencing synonymous nucleotide substitution.
Victor MP; Acharya D; Chakraborty S; Ghosh TC
Gene; 2020 Jun; 745():144640. PubMed ID: 32247037
[TBL] [Abstract][Full Text] [Related]
13. Codon usage of highly expressed genes affects proteome-wide translation efficiency.
Frumkin I; Lajoie MJ; Gregg CJ; Hornung G; Church GM; Pilpel Y
Proc Natl Acad Sci U S A; 2018 May; 115(21):E4940-E4949. PubMed ID: 29735666
[TBL] [Abstract][Full Text] [Related]
14. Comparison of codon usage and tRNAs in mitochondrial genomes of Candida species.
Kamatani T; Yamamoto T
Biosystems; 2007; 90(2):362-70. PubMed ID: 17123703
[TBL] [Abstract][Full Text] [Related]
15. Evidence for a trade-off between translational efficiency and splicing regulation in determining synonymous codon usage in Drosophila melanogaster.
Warnecke T; Hurst LD
Mol Biol Evol; 2007 Dec; 24(12):2755-62. PubMed ID: 17905999
[TBL] [Abstract][Full Text] [Related]
16. A rare codon-based translational program of cell proliferation.
Guimaraes JC; Mittal N; Gnann A; Jedlinski D; Riba A; Buczak K; Schmidt A; Zavolan M
Genome Biol; 2020 Feb; 21(1):44. PubMed ID: 32102681
[TBL] [Abstract][Full Text] [Related]
17. Codon-specific and general inhibition of protein synthesis by the tRNA-sequestering minigenes.
Delgado-Olivares L; Zamora-Romo E; Guarneros G; Hernandez-Sanchez J
Biochimie; 2006 Jul; 88(7):793-800. PubMed ID: 16488066
[TBL] [Abstract][Full Text] [Related]
18. On the possible role of tRNA base modifications in the evolution of codon usage: queuosine and Drosophila.
Chiari Y; Dion K; Colborn J; Parmakelis A; Powell JR
J Mol Evol; 2010 Apr; 70(4):339-45. PubMed ID: 20333371
[TBL] [Abstract][Full Text] [Related]
19. Coevolution of codon usage and tRNA genes leads to alternative stable states of biased codon usage.
Higgs PG; Ran W
Mol Biol Evol; 2008 Nov; 25(11):2279-91. PubMed ID: 18687657
[TBL] [Abstract][Full Text] [Related]
20. Synonymous Codons: Choose Wisely for Expression.
Brule CE; Grayhack EJ
Trends Genet; 2017 Apr; 33(4):283-297. PubMed ID: 28292534
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
