232 related articles for article (PubMed ID: 19581452)
1. Ancestral population genomics: the coalescent hidden Markov model approach.
Dutheil JY; Ganapathy G; Hobolth A; Mailund T; Uyenoyama MK; Schierup MH
Genetics; 2009 Sep; 183(1):259-74. PubMed ID: 19581452
[TBL] [Abstract][Full Text] [Related]
2. Genomic relationships and speciation times of human, chimpanzee, and gorilla inferred from a coalescent hidden Markov model.
Hobolth A; Christensen OF; Mailund T; Schierup MH
PLoS Genet; 2007 Feb; 3(2):e7. PubMed ID: 17319744
[TBL] [Abstract][Full Text] [Related]
3. TRAILS: Tree reconstruction of ancestry using incomplete lineage sorting.
Rivas-González I; Schierup MH; Wakeley J; Hobolth A
PLoS Genet; 2024 Feb; 20(2):e1010836. PubMed ID: 38330138
[TBL] [Abstract][Full Text] [Related]
4. Estimation of hominoid ancestral population sizes under bayesian coalescent models incorporating mutation rate variation and sequencing errors.
Burgess R; Yang Z
Mol Biol Evol; 2008 Sep; 25(9):1979-94. PubMed ID: 18603620
[TBL] [Abstract][Full Text] [Related]
5. Incomplete lineage sorting patterns among human, chimpanzee, and orangutan suggest recent orangutan speciation and widespread selection.
Hobolth A; Dutheil JY; Hawks J; Schierup MH; Mailund T
Genome Res; 2011 Mar; 21(3):349-56. PubMed ID: 21270173
[TBL] [Abstract][Full Text] [Related]
6. Likelihood and Bayes estimation of ancestral population sizes in hominoids using data from multiple loci.
Yang Z
Genetics; 2002 Dec; 162(4):1811-23. PubMed ID: 12524351
[TBL] [Abstract][Full Text] [Related]
7. Estimating divergence time and ancestral effective population size of Bornean and Sumatran orangutan subspecies using a coalescent hidden Markov model.
Mailund T; Dutheil JY; Hobolth A; Lunter G; Schierup MH
PLoS Genet; 2011 Mar; 7(3):e1001319. PubMed ID: 21408205
[TBL] [Abstract][Full Text] [Related]
8. A new isolation with migration model along complete genomes infers very different divergence processes among closely related great ape species.
Mailund T; Halager AE; Westergaard M; Dutheil JY; Munch K; Andersen LN; Lunter G; Prüfer K; Scally A; Hobolth A; Schierup MH
PLoS Genet; 2012; 8(12):e1003125. PubMed ID: 23284294
[TBL] [Abstract][Full Text] [Related]
9. Reconstructing the demographic history of the human lineage using whole-genome sequences from human and three great apes.
Hara Y; Imanishi T; Satta Y
Genome Biol Evol; 2012; 4(11):1133-45. PubMed ID: 22975719
[TBL] [Abstract][Full Text] [Related]
10. In silico phylogenomics using complete genomes: a case study on the evolution of hominoids.
Costa IR; Prosdocimi F; Jennings WB
Genome Res; 2016 Sep; 26(9):1257-67. PubMed ID: 27435933
[TBL] [Abstract][Full Text] [Related]
11. Unraveling recombination rate evolution using ancestral recombination maps.
Munch K; Schierup MH; Mailund T
Bioessays; 2014 Sep; 36(9):892-900. PubMed ID: 25043668
[TBL] [Abstract][Full Text] [Related]
12. Ancestral population genomics.
Dutheil JY; Hobolth A
Methods Mol Biol; 2012; 856():293-313. PubMed ID: 22399464
[TBL] [Abstract][Full Text] [Related]
13. A new approach to estimate parameters of speciation models with application to apes.
Becquet C; Przeworski M
Genome Res; 2007 Oct; 17(10):1505-19. PubMed ID: 17712021
[TBL] [Abstract][Full Text] [Related]
14. Linking great apes genome evolution across time scales using polymorphism-aware phylogenetic models.
De Maio N; Schlötterer C; Kosiol C
Mol Biol Evol; 2013 Oct; 30(10):2249-62. PubMed ID: 23906727
[TBL] [Abstract][Full Text] [Related]
15. Approximating the coalescent with recombination.
McVean GA; Cardin NJ
Philos Trans R Soc Lond B Biol Sci; 2005 Jul; 360(1459):1387-93. PubMed ID: 16048782
[TBL] [Abstract][Full Text] [Related]
16. Ancestral Population Genomics.
Dutheil JY; Hobolth A
Methods Mol Biol; 2019; 1910():555-589. PubMed ID: 31278677
[TBL] [Abstract][Full Text] [Related]
17. Lineage sorting in apes.
Mailund T; Munch K; Schierup MH
Annu Rev Genet; 2014; 48():519-35. PubMed ID: 25251849
[TBL] [Abstract][Full Text] [Related]
18. Ancestral Population Genomics with Jocx, a Coalescent Hidden Markov Model.
Cheng JY; Mailund T
Methods Mol Biol; 2020; 2090():167-189. PubMed ID: 31975168
[TBL] [Abstract][Full Text] [Related]
19. Maximum likelihood implementation of an isolation-with-migration model with three species for testing speciation with gene flow.
Zhu T; Yang Z
Mol Biol Evol; 2012 Oct; 29(10):3131-42. PubMed ID: 22504520
[TBL] [Abstract][Full Text] [Related]
20. Inference of recombination maps from a single pair of genomes and its application to ancient samples.
V Barroso G; Puzović N; Dutheil JY
PLoS Genet; 2019 Nov; 15(11):e1008449. PubMed ID: 31725722
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
