157 related articles for article (PubMed ID: 19689216)
1. Complete alternative splicing events are bubbles in splicing graphs.
Sammeth M
J Comput Biol; 2009 Aug; 16(8):1117-40. PubMed ID: 19689216
[TBL] [Abstract][Full Text] [Related]
2. Integrating alternative splicing detection into gene prediction.
Foissac S; Schiex T
BMC Bioinformatics; 2005 Feb; 6():25. PubMed ID: 15705189
[TBL] [Abstract][Full Text] [Related]
3. Non-EST based prediction of exon skipping and intron retention events using Pfam information.
Hiller M; Huse K; Platzer M; Backofen R
Nucleic Acids Res; 2005; 33(17):5611-21. PubMed ID: 16204458
[TBL] [Abstract][Full Text] [Related]
4. How prevalent is functional alternative splicing in the human genome?
Sorek R; Shamir R; Ast G
Trends Genet; 2004 Feb; 20(2):68-71. PubMed ID: 14746986
[TBL] [Abstract][Full Text] [Related]
5. A non-EST-based method for exon-skipping prediction.
Sorek R; Shemesh R; Cohen Y; Basechess O; Ast G; Shamir R
Genome Res; 2004 Aug; 14(8):1617-23. PubMed ID: 15289480
[TBL] [Abstract][Full Text] [Related]
6. Nanopore sequencing of full-length BRCA1 mRNA transcripts reveals co-occurrence of known exon skipping events.
de Jong LC; Cree S; Lattimore V; Wiggins GAR; Spurdle AB; ; Miller A; Kennedy MA; Walker LC
Breast Cancer Res; 2017 Nov; 19(1):127. PubMed ID: 29183387
[TBL] [Abstract][Full Text] [Related]
7. EasyCluster2: an improved tool for clustering and assembling long transcriptome reads.
Bevilacqua V; Pietroleonardo N; Giannino E; Stroppa F; Simone D; Pesole G; Picardi E
BMC Bioinformatics; 2014; 15 Suppl 15(Suppl 15):S7. PubMed ID: 25474441
[TBL] [Abstract][Full Text] [Related]
8. Different levels of alternative splicing among eukaryotes.
Kim E; Magen A; Ast G
Nucleic Acids Res; 2007; 35(1):125-31. PubMed ID: 17158149
[TBL] [Abstract][Full Text] [Related]
9. Deep RNA sequencing reveals a high frequency of alternative splicing events in the fungus Trichoderma longibrachiatum.
Xie BB; Li D; Shi WL; Qin QL; Wang XW; Rong JC; Sun CY; Huang F; Zhang XY; Dong XW; Chen XL; Zhou BC; Zhang YZ; Song XY
BMC Genomics; 2015 Feb; 16(1):54. PubMed ID: 25652134
[TBL] [Abstract][Full Text] [Related]
10. Large-scale identification and characterization of alternative splicing variants of human gene transcripts using 56,419 completely sequenced and manually annotated full-length cDNAs.
Takeda J; Suzuki Y; Nakao M; Barrero RA; Koyanagi KO; Jin L; Motono C; Hata H; Isogai T; Nagai K; Otsuki T; Kuryshev V; Shionyu M; Yura K; Go M; Thierry-Mieg J; Thierry-Mieg D; Wiemann S; Nomura N; Sugano S; Gojobori T; Imanishi T
Nucleic Acids Res; 2006; 34(14):3917-28. PubMed ID: 16914452
[TBL] [Abstract][Full Text] [Related]
11. Does distance matter? Variations in alternative 3' splicing regulation.
Akerman M; Mandel-Gutfreund Y
Nucleic Acids Res; 2007; 35(16):5487-98. PubMed ID: 17704130
[TBL] [Abstract][Full Text] [Related]
12. Genome-wide detection and analysis of alternative splicing for nucleotide binding site-leucine-rich repeats sequences in rice.
Gu L; Guo R
J Genet Genomics; 2007 Mar; 34(3):247-57. PubMed ID: 17498622
[TBL] [Abstract][Full Text] [Related]
13. Alternative splicing of mutually exclusive exons--a review.
Pohl M; Bortfeldt RH; Grützmann K; Schuster S
Biosystems; 2013 Oct; 114(1):31-8. PubMed ID: 23850531
[TBL] [Abstract][Full Text] [Related]
14. Heritability of alternative splicing in the human genome.
Kwan T; Benovoy D; Dias C; Gurd S; Serre D; Zuzan H; Clark TA; Schweitzer A; Staples MK; Wang H; Blume JE; Hudson TJ; Sladek R; Majewski J
Genome Res; 2007 Aug; 17(8):1210-8. PubMed ID: 17671095
[TBL] [Abstract][Full Text] [Related]
15. Efficient prediction of alternative splice forms using protein domain homology.
Hiller M; Backofen R; Heymann S; Busch A; Glaesser TM; Freytag JC
In Silico Biol; 2004; 4(2):195-208. PubMed ID: 15107023
[TBL] [Abstract][Full Text] [Related]
16. Alternative splicing of the sheep MITF gene: novel transcripts detectable in skin.
Saravanaperumal SA; Pediconi D; Renieri C; La Terza A
Gene; 2014 Nov; 552(1):165-75. PubMed ID: 25239663
[TBL] [Abstract][Full Text] [Related]
17. Changes in alternative splicing of human and mouse genes are accompanied by faster evolution of constitutive exons.
Cusack BP; Wolfe KH
Mol Biol Evol; 2005 Nov; 22(11):2198-208. PubMed ID: 16049198
[TBL] [Abstract][Full Text] [Related]
18. SpliceDetector: a software for detection of alternative splicing events in human and model organisms directly from transcript IDs.
Baharlou Houreh M; Ghorbani Kalkhajeh P; Niazi A; Ebrahimi F; Ebrahimie E
Sci Rep; 2018 Mar; 8(1):5063. PubMed ID: 29567976
[TBL] [Abstract][Full Text] [Related]
19. Alternative splicing in the human, mouse and rat genomes is associated with an increased frequency of exon creation and/or loss.
Modrek B; Lee CJ
Nat Genet; 2003 Jun; 34(2):177-80. PubMed ID: 12730695
[TBL] [Abstract][Full Text] [Related]
20. RASE: recognition of alternatively spliced exons in C.elegans.
Rätsch G; Sonnenburg S; Schölkopf B
Bioinformatics; 2005 Jun; 21 Suppl 1():i369-77. PubMed ID: 15961480
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
