197 related articles for article (PubMed ID: 19691339)
1. Identification of specific small molecule ligands for stem loop 3 ribonucleic acid of the packaging signal Psi of human immunodeficiency virus-1.
Warui DM; Baranger AM
J Med Chem; 2009 Sep; 52(17):5462-73. PubMed ID: 19691339
[TBL] [Abstract][Full Text] [Related]
2. Stem-loop SL4 of the HIV-1 psi RNA packaging signal exhibits weak affinity for the nucleocapsid protein. structural studies and implications for genome recognition.
Amarasinghe GK; Zhou J; Miskimon M; Chancellor KJ; McDonald JA; Matthews AG; Miller RR; Rouse MD; Summers MF
J Mol Biol; 2001 Dec; 314(5):961-70. PubMed ID: 11743714
[TBL] [Abstract][Full Text] [Related]
3. NMR structure of the HIV-1 nucleocapsid protein bound to stem-loop SL2 of the psi-RNA packaging signal. Implications for genome recognition.
Amarasinghe GK; De Guzman RN; Turner RB; Chancellor KJ; Wu ZR; Summers MF
J Mol Biol; 2000 Aug; 301(2):491-511. PubMed ID: 10926523
[TBL] [Abstract][Full Text] [Related]
4. Direct mass spectrometric determination of the stoichiometry and binding affinity of the complexes between nucleocapsid protein and RNA stem-loop hairpins of the HIV-1 Psi-recognition element.
Hagan N; Fabris D
Biochemistry; 2003 Sep; 42(36):10736-45. PubMed ID: 12962498
[TBL] [Abstract][Full Text] [Related]
5. Identification of small molecule inhibitors of the HIV-1 nucleocapsid-stem-loop 3 RNA complex.
Warui DM; Baranger AM
J Med Chem; 2012 May; 55(9):4132-41. PubMed ID: 22480197
[TBL] [Abstract][Full Text] [Related]
6. NMR structure of stem-loop SL2 of the HIV-1 psi RNA packaging signal reveals a novel A-U-A base-triple platform.
Amarasinghe GK; De Guzman RN; Turner RB; Summers MF
J Mol Biol; 2000 May; 299(1):145-56. PubMed ID: 10860728
[TBL] [Abstract][Full Text] [Related]
7. Identification of an aminoacridine derivative that binds to RNA tetraloops.
Yan Z; Sikri S; Beveridge DL; Baranger AM
J Med Chem; 2007 Aug; 50(17):4096-104. PubMed ID: 17665894
[TBL] [Abstract][Full Text] [Related]
8. Identification of a high affinity nucleocapsid protein binding element within the Moloney murine leukemia virus Psi-RNA packaging signal: implications for genome recognition.
D'Souza V; Melamed J; Habib D; Pullen K; Wallace K; Summers MF
J Mol Biol; 2001 Nov; 314(2):217-32. PubMed ID: 11718556
[TBL] [Abstract][Full Text] [Related]
9. Specificity of neomycin analogues bound to the packaging region of human immunodeficiency virus type 1 RNA.
McPike MP; Goodisman J; Dabrowiak JC
Bioorg Med Chem; 2004 Apr; 12(8):1835-43. PubMed ID: 15051052
[TBL] [Abstract][Full Text] [Related]
10. The T12I mutation within the SP1 region of Gag restricts packaging of spliced viral RNA into human immunodeficiency virus type 1 with mutated RNA packaging signals and mutated nucleocapsid sequence.
Roy BB; Russell RS; Turner D; Liang C
Virology; 2006 Jan; 344(2):304-14. PubMed ID: 16226779
[TBL] [Abstract][Full Text] [Related]
11. Three-dimensional folding of an RNA hairpin required for packaging HIV-1.
Pappalardo L; Kerwood DJ; Pelczer I; Borer PN
J Mol Biol; 1998 Oct; 282(4):801-18. PubMed ID: 9743628
[TBL] [Abstract][Full Text] [Related]
12. Inhibition of HIV-1 by a peptide ligand of the genomic RNA packaging signal Psi.
Dietz J; Koch J; Kaur A; Raja C; Stein S; Grez M; Pustowka A; Mensch S; Ferner J; Möller L; Bannert N; Tampé R; Divita G; Mély Y; Schwalbe H; Dietrich U
ChemMedChem; 2008 May; 3(5):749-55. PubMed ID: 18205165
[TBL] [Abstract][Full Text] [Related]
13. RNA-ligand interactions: affinity and specificity of aminoglycoside dimers and acridine conjugates to the HIV-1 Rev response element.
Luedtke NW; Liu Q; Tor Y
Biochemistry; 2003 Oct; 42(39):11391-403. PubMed ID: 14516190
[TBL] [Abstract][Full Text] [Related]
14. Mapping noncovalent ligand binding to stemloop domains of the HIV-1 packaging signal by tandem mass spectrometry.
Turner KB; Hagan NA; Kohlway AS; Fabris D
J Am Soc Mass Spectrom; 2006 Oct; 17(10):1402-1411. PubMed ID: 16872834
[TBL] [Abstract][Full Text] [Related]
15. Affinities of packaging domain loops in HIV-1 RNA for the nucleocapsid protein.
Shubsda MF; Paoletti AC; Hudson BS; Borer PN
Biochemistry; 2002 Apr; 41(16):5276-82. PubMed ID: 11955077
[TBL] [Abstract][Full Text] [Related]
16. Affinities of the nucleocapsid protein for variants of SL3 RNA in HIV-1.
Paoletti AC; Shubsda MF; Hudson BS; Borer PN
Biochemistry; 2002 Dec; 41(51):15423-8. PubMed ID: 12484783
[TBL] [Abstract][Full Text] [Related]
17. An RNA-binding compound that stabilizes the HIV-1 gRNA packaging signal structure and specifically blocks HIV-1 RNA encapsidation.
Ingemarsdotter CK; Zeng J; Long Z; Lever AML; Kenyon JC
Retrovirology; 2018 Mar; 15(1):25. PubMed ID: 29540207
[TBL] [Abstract][Full Text] [Related]
18. Selection and characterization of peptides specifically binding to HIV-1 psi (psi) RNA.
Park MY; Kwon J; Lee S; You J; Myung H
Virus Res; 2004 Nov; 106(1):77-81. PubMed ID: 15522450
[TBL] [Abstract][Full Text] [Related]
19. Nucleobase amino acids incorporated into the HIV-1 nucleocapsid protein increased the binding affinity and specificity for a hairpin RNA.
Takahashi T; Ueno A; Mihara H
Chembiochem; 2002 Jun; 3(6):543-9. PubMed ID: 12325010
[TBL] [Abstract][Full Text] [Related]
20. Structural changes in the SL5 and SL6 leader sequences of HIV-1 RNA following interactions with the viral mGag protein.
Roldan A; Liang C; Wainberg MA
Virus Res; 2011 Jan; 155(1):98-105. PubMed ID: 20851722
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
