These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.
44. 3MOTIF: visualizing conserved protein sequence motifs in the protein structure database. Bennett SP; Nevill-Manning CG; Brutlag DL Bioinformatics; 2003 Mar; 19(4):541-2. PubMed ID: 12611811 [TBL] [Abstract][Full Text] [Related]
45. MODEL-molecular descriptor lab: a web-based server for computing structural and physicochemical features of compounds. Li ZR; Han LY; Xue Y; Yap CW; Li H; Jiang L; Chen YZ Biotechnol Bioeng; 2007 Jun; 97(2):389-96. PubMed ID: 17013940 [TBL] [Abstract][Full Text] [Related]
46. Integrating genomic information with protein sequence and 3D atomic level structure at the RCSB protein data bank. Prlic A; Kalro T; Bhattacharya R; Christie C; Burley SK; Rose PW Bioinformatics; 2016 Dec; 32(24):3833-3835. PubMed ID: 27551105 [TBL] [Abstract][Full Text] [Related]
47. The ConSurf-HSSP database: the mapping of evolutionary conservation among homologs onto PDB structures. Glaser F; Rosenberg Y; Kessel A; Pupko T; Ben-Tal N Proteins; 2005 Feb; 58(3):610-7. PubMed ID: 15614759 [TBL] [Abstract][Full Text] [Related]
48. FlexServ: an integrated tool for the analysis of protein flexibility. Camps J; Carrillo O; Emperador A; Orellana L; Hospital A; Rueda M; Cicin-Sain D; D'Abramo M; Gelpí JL; Orozco M Bioinformatics; 2009 Jul; 25(13):1709-10. PubMed ID: 19429600 [TBL] [Abstract][Full Text] [Related]
49. How strongly do sequence conservation patterns and empirical scales correlate with exposure patterns of transmembrane helices of membrane proteins? Park Y; Helms V Biopolymers; 2006 Nov; 83(4):389-99. PubMed ID: 16838301 [TBL] [Abstract][Full Text] [Related]
50. Transmembrane helix prediction using amino acid property features and latent semantic analysis. Ganapathiraju M; Balakrishnan N; Reddy R; Klein-Seetharaman J BMC Bioinformatics; 2008; 9 Suppl 1(Suppl 1):S4. PubMed ID: 18315857 [TBL] [Abstract][Full Text] [Related]
51. Transmembrane proteins in the Protein Data Bank: identification and classification. Tusnády GE; Dosztányi Z; Simon I Bioinformatics; 2004 Nov; 20(17):2964-72. PubMed ID: 15180935 [TBL] [Abstract][Full Text] [Related]
52. Adding some SPICE to DAS. Prlić A; Down TA; Hubbard TJ Bioinformatics; 2005 Sep; 21 Suppl 2(Suppl 2):ii40-1. PubMed ID: 16204122 [TBL] [Abstract][Full Text] [Related]
53. JVirGel 2.0: computational prediction of proteomes separated via two-dimensional gel electrophoresis under consideration of membrane and secreted proteins. Hiller K; Grote A; Maneck M; Münch R; Jahn D Bioinformatics; 2006 Oct; 22(19):2441-3. PubMed ID: 16870933 [TBL] [Abstract][Full Text] [Related]
55. MolAxis: a server for identification of channels in macromolecules. Yaffe E; Fishelovitch D; Wolfson HJ; Halperin D; Nussinov R Nucleic Acids Res; 2008 Jul; 36(Web Server issue):W210-5. PubMed ID: 18448468 [TBL] [Abstract][Full Text] [Related]
56. State-of-the-art bioinformatics protein structure prediction tools (Review). Pavlopoulou A; Michalopoulos I Int J Mol Med; 2011 Sep; 28(3):295-310. PubMed ID: 21617841 [TBL] [Abstract][Full Text] [Related]
57. Clustal W and Clustal X version 2.0. Larkin MA; Blackshields G; Brown NP; Chenna R; McGettigan PA; McWilliam H; Valentin F; Wallace IM; Wilm A; Lopez R; Thompson JD; Gibson TJ; Higgins DG Bioinformatics; 2007 Nov; 23(21):2947-8. PubMed ID: 17846036 [TBL] [Abstract][Full Text] [Related]
58. MetaPSICOV: combining coevolution methods for accurate prediction of contacts and long range hydrogen bonding in proteins. Jones DT; Singh T; Kosciolek T; Tetchner S Bioinformatics; 2015 Apr; 31(7):999-1006. PubMed ID: 25431331 [TBL] [Abstract][Full Text] [Related]
59. TOPDOM: database of domains and motifs with conservative location in transmembrane proteins. Tusnády GE; Kalmár L; Hegyi H; Tompa P; Simon I Bioinformatics; 2008 Jun; 24(12):1469-70. PubMed ID: 18434342 [TBL] [Abstract][Full Text] [Related]
60. Capturing expert knowledge with argumentation: a case study in bioinformatics. Jefferys BR; Kelley LA; Sergot MJ; Fox J; Sternberg MJ Bioinformatics; 2006 Apr; 22(8):924-33. PubMed ID: 16446279 [TBL] [Abstract][Full Text] [Related] [Previous] [Next] [New Search]