These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

142 related articles for article (PubMed ID: 19765314)

  • 1. Exploring protein structural dissimilarity to facilitate structure classification.
    Jain P; Hirst JD
    BMC Struct Biol; 2009 Sep; 9():60. PubMed ID: 19765314
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Automatic structure classification of small proteins using random forest.
    Jain P; Hirst JD
    BMC Bioinformatics; 2010 Jul; 11():364. PubMed ID: 20594334
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Automatic classification of protein structures using low-dimensional structure space mappings.
    Asarnow D; Singh R
    BMC Bioinformatics; 2014; 15 Suppl 2(Suppl 2):S1. PubMed ID: 24564500
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Supervised machine learning algorithms for protein structure classification.
    Jain P; Garibaldi JM; Hirst JD
    Comput Biol Chem; 2009 Jun; 33(3):216-23. PubMed ID: 19473879
    [TBL] [Abstract][Full Text] [Related]  

  • 5. SCOP database in 2002: refinements accommodate structural genomics.
    Lo Conte L; Brenner SE; Hubbard TJ; Chothia C; Murzin AG
    Nucleic Acids Res; 2002 Jan; 30(1):264-7. PubMed ID: 11752311
    [TBL] [Abstract][Full Text] [Related]  

  • 6. AutoSCOP: automated prediction of SCOP classifications using unique pattern-class mappings.
    Gewehr JE; Hintermair V; Zimmer R
    Bioinformatics; 2007 May; 23(10):1203-10. PubMed ID: 17379694
    [TBL] [Abstract][Full Text] [Related]  

  • 7. SCOPe: Manual Curation and Artifact Removal in the Structural Classification of Proteins - extended Database.
    Chandonia JM; Fox NK; Brenner SE
    J Mol Biol; 2017 Feb; 429(3):348-355. PubMed ID: 27914894
    [TBL] [Abstract][Full Text] [Related]  

  • 8. SCOP database in 2004: refinements integrate structure and sequence family data.
    Andreeva A; Howorth D; Brenner SE; Hubbard TJ; Chothia C; Murzin AG
    Nucleic Acids Res; 2004 Jan; 32(Database issue):D226-9. PubMed ID: 14681400
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Data growth and its impact on the SCOP database: new developments.
    Andreeva A; Howorth D; Chandonia JM; Brenner SE; Hubbard TJ; Chothia C; Murzin AG
    Nucleic Acids Res; 2008 Jan; 36(Database issue):D419-25. PubMed ID: 18000004
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Towards an automatic classification of protein structural domains based on structural similarity.
    Sam V; Tai CH; Garnier J; Gibrat JF; Lee B; Munson PJ
    BMC Bioinformatics; 2008 Jan; 9():74. PubMed ID: 18237410
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Automated assignment of SCOP and CATH protein structure classifications from FSSP scores.
    Getz G; Vendruscolo M; Sachs D; Domany E
    Proteins; 2002 Mar; 46(4):405-15. PubMed ID: 11835515
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Structural Class Classification of 3D Protein Structure Based on Multi-View 2D Images.
    Suryanto CH; Saigo H; Fukui K
    IEEE/ACM Trans Comput Biol Bioinform; 2018; 15(1):286-299. PubMed ID: 28113600
    [TBL] [Abstract][Full Text] [Related]  

  • 13. ArchDB: automated protein loop classification as a tool for structural genomics.
    Espadaler J; Fernandez-Fuentes N; Hermoso A; Querol E; Aviles FX; Sternberg MJ; Oliva B
    Nucleic Acids Res; 2004 Jan; 32(Database issue):D185-8. PubMed ID: 14681390
    [TBL] [Abstract][Full Text] [Related]  

  • 14. SCOPe: Structural Classification of Proteins--extended, integrating SCOP and ASTRAL data and classification of new structures.
    Fox NK; Brenner SE; Chandonia JM
    Nucleic Acids Res; 2014 Jan; 42(Database issue):D304-9. PubMed ID: 24304899
    [TBL] [Abstract][Full Text] [Related]  

  • 15. A fast SCOP fold classification system using content-based E-Predict algorithm.
    Chi PH; Shyu CR; Xu D
    BMC Bioinformatics; 2006 Jul; 7():362. PubMed ID: 16872501
    [TBL] [Abstract][Full Text] [Related]  

  • 16. SCOP: a structural classification of proteins database.
    Hubbard TJ; Murzin AG; Brenner SE; Chothia C
    Nucleic Acids Res; 1997 Jan; 25(1):236-9. PubMed ID: 9016544
    [TBL] [Abstract][Full Text] [Related]  

  • 17. How a spatial arrangement of secondary structure elements is dispersed in the universe of protein folds.
    Minami S; Sawada K; Chikenji G
    PLoS One; 2014; 9(9):e107959. PubMed ID: 25243952
    [TBL] [Abstract][Full Text] [Related]  

  • 18. SCOP: a structural classification of proteins database for the investigation of sequences and structures.
    Murzin AG; Brenner SE; Hubbard T; Chothia C
    J Mol Biol; 1995 Apr; 247(4):536-40. PubMed ID: 7723011
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Evolutionarily consistent families in SCOP: sequence, structure and function.
    Pethica RB; Levitt M; Gough J
    BMC Struct Biol; 2012 Oct; 12():27. PubMed ID: 23078280
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Assessing annotation transfer for genomics: quantifying the relations between protein sequence, structure and function through traditional and probabilistic scores.
    Wilson CA; Kreychman J; Gerstein M
    J Mol Biol; 2000 Mar; 297(1):233-49. PubMed ID: 10704319
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 8.