BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

244 related articles for article (PubMed ID: 19808881)

  • 1. Pathway identification by network pruning in the metabolic network of Escherichia coli.
    Gerlee P; Lizana L; Sneppen K
    Bioinformatics; 2009 Dec; 25(24):3282-8. PubMed ID: 19808881
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Metabolic systems cost-benefit analysis for interpreting network structure and regulation.
    Carlson RP
    Bioinformatics; 2007 May; 23(10):1258-64. PubMed ID: 17344237
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Metabolic pathfinding using RPAIR annotation.
    Faust K; Croes D; van Helden J
    J Mol Biol; 2009 May; 388(2):390-414. PubMed ID: 19281817
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Computing the shortest elementary flux modes in genome-scale metabolic networks.
    de Figueiredo LF; Podhorski A; Rubio A; Kaleta C; Beasley JE; Schuster S; Planes FJ
    Bioinformatics; 2009 Dec; 25(23):3158-65. PubMed ID: 19793869
    [TBL] [Abstract][Full Text] [Related]  

  • 5. A stochastic model for the evolution of metabolic networks with neighbor dependence.
    Mithani A; Preston GM; Hein J
    Bioinformatics; 2009 Jun; 25(12):1528-35. PubMed ID: 19376826
    [TBL] [Abstract][Full Text] [Related]  

  • 6. An extended bioreaction database that significantly improves reconstruction and analysis of genome-scale metabolic networks.
    Stelzer M; Sun J; Kamphans T; Fekete SP; Zeng AP
    Integr Biol (Camb); 2011 Nov; 3(11):1071-86. PubMed ID: 21952610
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Inferring meaningful pathways in weighted metabolic networks.
    Croes D; Couche F; Wodak SJ; van Helden J
    J Mol Biol; 2006 Feb; 356(1):222-36. PubMed ID: 16337962
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Reconstruction and analysis of human liver-specific metabolic network based on CNHLPP data.
    Zhao J; Geng C; Tao L; Zhang D; Jiang Y; Tang K; Zhu R; Yu H; Zhang W; He F; Li Y; Cao Z
    J Proteome Res; 2010 Apr; 9(4):1648-58. PubMed ID: 20136149
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Analysis of metabolic network based on conservation of molecular structure.
    Hogiri T; Furusawa C; Shinfuku Y; Ono N; Shimizu H
    Biosystems; 2009 Mar; 95(3):175-8. PubMed ID: 18834921
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Biological network mapping and source signal deduction.
    Brynildsen MP; Wu TY; Jang SS; Liao JC
    Bioinformatics; 2007 Jul; 23(14):1783-91. PubMed ID: 17495996
    [TBL] [Abstract][Full Text] [Related]  

  • 11. A structural census of metabolic networks for E. coli.
    Saqi MA; Sternberg MJ
    J Mol Biol; 2001 Nov; 313(5):1195-206. PubMed ID: 11700074
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Metabolic networks are NP-hard to reconstruct.
    Nikoloski Z; Grimbs S; May P; Selbig J
    J Theor Biol; 2008 Oct; 254(4):807-16. PubMed ID: 18682254
    [TBL] [Abstract][Full Text] [Related]  

  • 13. A computational analysis of protein interactions in metabolic networks reveals novel enzyme pairs potentially involved in metabolic channeling.
    Huthmacher C; Gille C; Holzhütter HG
    J Theor Biol; 2008 Jun; 252(3):456-64. PubMed ID: 17988690
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Observing local and global properties of metabolic pathways: 'load points' and 'choke points' in the metabolic networks.
    Rahman SA; Schomburg D
    Bioinformatics; 2006 Jul; 22(14):1767-74. PubMed ID: 16682421
    [TBL] [Abstract][Full Text] [Related]  

  • 15. MetNetAligner: a web service tool for metabolic network alignments.
    Cheng Q; Harrison R; Zelikovsky A
    Bioinformatics; 2009 Aug; 25(15):1989-90. PubMed ID: 19414533
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Two-dimensional statistical recoupling for the identification of perturbed metabolic networks from NMR spectroscopy.
    Blaise BJ; Navratil V; Domange C; Shintu L; Dumas ME; Elena-Herrmann B; Emsley L; Toulhoat P
    J Proteome Res; 2010 Sep; 9(9):4513-20. PubMed ID: 20590164
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Structural comparison of metabolic networks in selected single cell organisms.
    Zhu D; Qin ZS
    BMC Bioinformatics; 2005 Jan; 6():8. PubMed ID: 15649332
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Hierarchical structure and modules in the Escherichia coli transcriptional regulatory network revealed by a new top-down approach.
    Ma HW; Buer J; Zeng AP
    BMC Bioinformatics; 2004 Dec; 5():199. PubMed ID: 15603590
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Multiple high-throughput analyses monitor the response of E. coli to perturbations.
    Ishii N; Nakahigashi K; Baba T; Robert M; Soga T; Kanai A; Hirasawa T; Naba M; Hirai K; Hoque A; Ho PY; Kakazu Y; Sugawara K; Igarashi S; Harada S; Masuda T; Sugiyama N; Togashi T; Hasegawa M; Takai Y; Yugi K; Arakawa K; Iwata N; Toya Y; Nakayama Y; Nishioka T; Shimizu K; Mori H; Tomita M
    Science; 2007 Apr; 316(5824):593-7. PubMed ID: 17379776
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Metabolic pathway analysis web service (Pathway Hunter Tool at CUBIC).
    Rahman SA; Advani P; Schunk R; Schrader R; Schomburg D
    Bioinformatics; 2005 Apr; 21(7):1189-93. PubMed ID: 15572476
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 13.