These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

145 related articles for article (PubMed ID: 19832975)

  • 1. Clustering of protein domains for functional and evolutionary studies.
    Goldstein P; Zucko J; Vujaklija D; Krisko A; Hranueli D; Long PF; Etchebest C; Basrak B; Cullum J
    BMC Bioinformatics; 2009 Oct; 10():335. PubMed ID: 19832975
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Clustering of protein families into functional subtypes using Relative Complexity Measure with reduced amino acid alphabets.
    Albayrak A; Otu HH; Sezerman UO
    BMC Bioinformatics; 2010 Aug; 11():428. PubMed ID: 20718947
    [TBL] [Abstract][Full Text] [Related]  

  • 3. SplitTester: software to identify domains responsible for functional divergence in protein family.
    Gao X; Vander Velden KA; Voytas DF; Gu X
    BMC Bioinformatics; 2005 Jun; 6():137. PubMed ID: 15929795
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Joint evolutionary trees: a large-scale method to predict protein interfaces based on sequence sampling.
    Engelen S; Trojan LA; Sacquin-Mora S; Lavery R; Carbone A
    PLoS Comput Biol; 2009 Jan; 5(1):e1000267. PubMed ID: 19165315
    [TBL] [Abstract][Full Text] [Related]  

  • 5. On the quality of tree-based protein classification.
    Lazareva-Ulitsky B; Diemer K; Thomas PD
    Bioinformatics; 2005 May; 21(9):1876-90. PubMed ID: 15647305
    [TBL] [Abstract][Full Text] [Related]  

  • 6. ProClust: improved clustering of protein sequences with an extended graph-based approach.
    Pipenbacher P; Schliep A; Schneckener S; Schönhuth A; Schomburg D; Schrader R
    Bioinformatics; 2002; 18 Suppl 2():S182-91. PubMed ID: 12386002
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Cross-over between discrete and continuous protein structure space: insights into automatic classification and networks of protein structures.
    Pascual-García A; Abia D; Ortiz AR; Bastolla U
    PLoS Comput Biol; 2009 Mar; 5(3):e1000331. PubMed ID: 19325884
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Efficient algorithms for accurate hierarchical clustering of huge datasets: tackling the entire protein space.
    Loewenstein Y; Portugaly E; Fromer M; Linial M
    Bioinformatics; 2008 Jul; 24(13):i41-9. PubMed ID: 18586742
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Robust sequence alignment using evolutionary rates coupled with an amino acid substitution matrix.
    Ndhlovu A; Hazelhurst S; Durand PM
    BMC Bioinformatics; 2015 Aug; 16():255. PubMed ID: 26269100
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Super paramagnetic clustering of protein sequences.
    Tetko IV; Facius A; Ruepp A; Mewes HW
    BMC Bioinformatics; 2005 Apr; 6():82. PubMed ID: 15804359
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Incremental generation of summarized clustering hierarchy for protein family analysis.
    Chen CY; Oyang YJ; Juan HF
    Bioinformatics; 2004 Nov; 20(16):2586-96. PubMed ID: 15130937
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Exploratory visual analysis of conserved domains on multiple sequence alignments.
    Jankun-Kelly TJ; Lindeman AD; Bridges SM
    BMC Bioinformatics; 2009 Oct; 10 Suppl 11(Suppl 11):S7. PubMed ID: 19811691
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Predicting ligand binding residues and functional sites using multipositional correlations with graph theoretic clustering and kernel CCA.
    González AJ; Liao L; Wu CH
    IEEE/ACM Trans Comput Biol Bioinform; 2012; 9(4):992-1001. PubMed ID: 22025754
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Reconstruction of ancestral protein sequences and its applications.
    Cai W; Pei J; Grishin NV
    BMC Evol Biol; 2004 Sep; 4():33. PubMed ID: 15377393
    [TBL] [Abstract][Full Text] [Related]  

  • 15. The ranging of amino acids substitution matrices of various types in accordance with the alignment accuracy criterion.
    Polyanovsky V; Lifanov A; Esipova N; Tumanyan V
    BMC Bioinformatics; 2020 Sep; 21(Suppl 11):294. PubMed ID: 32921315
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Isofunctional Protein Subfamily Detection Using Data Integration and Spectral Clustering.
    Boari de Lima E; Meira W; Melo-Minardi RC
    PLoS Comput Biol; 2016 Jun; 12(6):e1005001. PubMed ID: 27348631
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Evolutionary rates at codon sites may be used to align sequences and infer protein domain function.
    Durand PM; Hazelhurst S; Coetzer TL
    BMC Bioinformatics; 2010 Mar; 11():151. PubMed ID: 20334658
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Capturing protein sequence-structure specificity using computational sequence design.
    Mach P; Koehl P
    Proteins; 2013 Sep; 81(9):1556-70. PubMed ID: 23609941
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Predicting functional sites with an automated algorithm suitable for heterogeneous datasets.
    La D; Livesay DR
    BMC Bioinformatics; 2005 May; 6():116. PubMed ID: 15890082
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Evaluation and improvements of clustering algorithms for detecting remote homologous protein families.
    Bernardes JS; Vieira FR; Costa LM; Zaverucha G
    BMC Bioinformatics; 2015 Feb; 16():34. PubMed ID: 25651949
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 8.