These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.
131 related articles for article (PubMed ID: 19833136)
21. Protein folding: from the levinthal paradox to structure prediction. Honig B J Mol Biol; 1999 Oct; 293(2):283-93. PubMed ID: 10550209 [TBL] [Abstract][Full Text] [Related]
22. Study of the Villin headpiece folding dynamics by combining coarse-grained Monte Carlo evolution and all-atom molecular dynamics. De Mori GM; Colombo G; Micheletti C Proteins; 2005 Feb; 58(2):459-71. PubMed ID: 15521059 [TBL] [Abstract][Full Text] [Related]
23. Lysozyme folded in silico according to the limited conformational sub-space. Jurkowski W; Brylinski M; Konieczny L; Roterman I J Biomol Struct Dyn; 2004 Oct; 22(2):149-58. PubMed ID: 15317476 [TBL] [Abstract][Full Text] [Related]
24. Computational design of proteins stereochemically optimized in size, stability, and folding speed. Joshi S; Rana S; Wangikar P; Durani S Biopolymers; 2006 Oct; 83(2):122-34. PubMed ID: 16683262 [TBL] [Abstract][Full Text] [Related]
25. Contact pair dynamics during folding of two small proteins: chicken villin head piece and the Alzheimer protein beta-amyloid. Mukherjee A; Bagchi B J Chem Phys; 2004 Jan; 120(3):1602-12. PubMed ID: 15268287 [TBL] [Abstract][Full Text] [Related]
26. Polypeptide folding using Monte Carlo sampling, concerted rotation, and continuum solvation. Ulmschneider JP; Jorgensen WL J Am Chem Soc; 2004 Feb; 126(6):1849-57. PubMed ID: 14871118 [TBL] [Abstract][Full Text] [Related]
27. Optimizing physical energy functions for protein folding. Fujitsuka Y; Takada S; Luthey-Schulten ZA; Wolynes PG Proteins; 2004 Jan; 54(1):88-103. PubMed ID: 14705026 [TBL] [Abstract][Full Text] [Related]
28. A coarse-grained Langevin molecular dynamics approach to de novo protein structure prediction. Sasaki TN; Cetin H; Sasai M Biochem Biophys Res Commun; 2008 May; 369(2):500-6. PubMed ID: 18294960 [TBL] [Abstract][Full Text] [Related]
29. Identifying folding nucleus based on residue contact networks of proteins. Li J; Wang J; Wang W Proteins; 2008 Jun; 71(4):1899-907. PubMed ID: 18175318 [TBL] [Abstract][Full Text] [Related]
30. Native topology or specific interactions: what is more important for protein folding? Ferrara P; Caflisch A J Mol Biol; 2001 Mar; 306(4):837-50. PubMed ID: 11243792 [TBL] [Abstract][Full Text] [Related]
31. Exploring the protein folding free energy landscape: coupling replica exchange method with P3ME/RESPA algorithm. Zhou R J Mol Graph Model; 2004 May; 22(5):451-63. PubMed ID: 15099840 [TBL] [Abstract][Full Text] [Related]
32. Direct folding simulation of alpha-helices and beta-hairpins based on a single all-atom force field with an implicit solvation model. Jang S; Kim E; Pak Y Proteins; 2007 Jan; 66(1):53-60. PubMed ID: 17063490 [TBL] [Abstract][Full Text] [Related]
33. Backbone dynamics, fast folding, and secondary structure formation in helical proteins and peptides. Hardin C; Luthey-Schulten Z; Wolynes PG Proteins; 1999 Feb; 34(3):281-94. PubMed ID: 10024016 [TBL] [Abstract][Full Text] [Related]
34. Simulated folding in polypeptides of diversified molecular tacticity: implications for protein folding and de novo design. Ramakrishnan V; Ranbhor R; Durani S Biopolymers; 2005 Jun; 78(2):96-105. PubMed ID: 15690413 [TBL] [Abstract][Full Text] [Related]
35. Kinetics of protein folding. A lattice model study of the requirements for folding to the native state. Sali A; Shakhnovich E; Karplus M J Mol Biol; 1994 Feb; 235(5):1614-36. PubMed ID: 8107095 [TBL] [Abstract][Full Text] [Related]
36. Cooperativity in two-state protein folding kinetics. Weikl TR; Palassini M; Dill KA Protein Sci; 2004 Mar; 13(3):822-9. PubMed ID: 14978313 [TBL] [Abstract][Full Text] [Related]
37. Protein structure prediction: combining de novo modeling with sparse experimental data. Latek D; Ekonomiuk D; Kolinski A J Comput Chem; 2007 Jul; 28(10):1668-76. PubMed ID: 17342709 [TBL] [Abstract][Full Text] [Related]
38. Identification of the protein folding transition state from molecular dynamics trajectories. Muff S; Caflisch A J Chem Phys; 2009 Mar; 130(12):125104. PubMed ID: 19334897 [TBL] [Abstract][Full Text] [Related]
39. Essential dynamics of reversible peptide folding: memory-free conformational dynamics governed by internal hydrogen bonds. de Groot BL; Daura X; Mark AE; Grubmüller H J Mol Biol; 2001 May; 309(1):299-313. PubMed ID: 11491298 [TBL] [Abstract][Full Text] [Related]
40. Overcoming entropic barrier with coupled sampling at dual resolutions. Lwin TZ; Luo R J Chem Phys; 2005 Nov; 123(19):194904. PubMed ID: 16321110 [TBL] [Abstract][Full Text] [Related] [Previous] [Next] [New Search]