162 related articles for article (PubMed ID: 19845017)
1. Image segmentation and dynamic lineage analysis in single-cell fluorescence microscopy.
Wang Q; Niemi J; Tan CM; You L; West M
Cytometry A; 2010 Jan; 77(1):101-10. PubMed ID: 19845017
[TBL] [Abstract][Full Text] [Related]
2. DeLTA: Automated cell segmentation, tracking, and lineage reconstruction using deep learning.
Lugagne JB; Lin H; Dunlop MJ
PLoS Comput Biol; 2020 Apr; 16(4):e1007673. PubMed ID: 32282792
[TBL] [Abstract][Full Text] [Related]
3. SuperSegger: robust image segmentation, analysis and lineage tracking of bacterial cells.
Stylianidou S; Brennan C; Nissen SB; Kuwada NJ; Wiggins PA
Mol Microbiol; 2016 Nov; 102(4):690-700. PubMed ID: 27569113
[TBL] [Abstract][Full Text] [Related]
4. An integrated image analysis platform to quantify signal transduction in single cells.
Pelet S; Dechant R; Lee SS; van Drogen F; Peter M
Integr Biol (Camb); 2012 Oct; 4(10):1274-82. PubMed ID: 22976484
[TBL] [Abstract][Full Text] [Related]
5. ESC-Track: A computer workflow for 4-D segmentation, tracking, lineage tracing and dynamic context analysis of ESCs.
Fernández-de-Manúel L; Díaz-Díaz C; Jiménez-Carretero D; Torres M; Montoya MC
Biotechniques; 2017 May; 62(5):215-222. PubMed ID: 28528574
[TBL] [Abstract][Full Text] [Related]
6. BactImAS: a platform for processing and analysis of bacterial time-lapse microscopy movies.
Mekterović I; Mekterović D; Maglica Z
BMC Bioinformatics; 2014 Jul; 15(1):251. PubMed ID: 25059528
[TBL] [Abstract][Full Text] [Related]
7. FogBank: a single cell segmentation across multiple cell lines and image modalities.
Chalfoun J; Majurski M; Dima A; Stuelten C; Peskin A; Brady M
BMC Bioinformatics; 2014 Dec; 15(1):431. PubMed ID: 25547324
[TBL] [Abstract][Full Text] [Related]
8. A Cell Segmentation/Tracking Tool Based on Machine Learning.
Deter HS; Dies M; Cameron CC; Butzin NC; Buceta J
Methods Mol Biol; 2019; 2040():399-422. PubMed ID: 31432490
[TBL] [Abstract][Full Text] [Related]
9. TLM-Tracker: software for cell segmentation, tracking and lineage analysis in time-lapse microscopy movies.
Klein J; Leupold S; Biegler I; Biedendieck R; Münch R; Jahn D
Bioinformatics; 2012 Sep; 28(17):2276-7. PubMed ID: 22772947
[TBL] [Abstract][Full Text] [Related]
10. Acquiring fluorescence time-lapse movies of budding yeast and analyzing single-cell dynamics using GRAFTS.
Zopf CJ; Maheshri N
J Vis Exp; 2013 Jul; (77):e50456. PubMed ID: 23892428
[TBL] [Abstract][Full Text] [Related]
11. Measuring single-cell gene expression dynamics in bacteria using fluorescence time-lapse microscopy.
Young JW; Locke JC; Altinok A; Rosenfeld N; Bacarian T; Swain PS; Mjolsness E; Elowitz MB
Nat Protoc; 2011 Dec; 7(1):80-8. PubMed ID: 22179594
[TBL] [Abstract][Full Text] [Related]
12. LEVER: software tools for segmentation, tracking and lineaging of proliferating cells.
Winter M; Mankowski W; Wait E; Temple S; Cohen AR
Bioinformatics; 2016 Nov; 32(22):3530-3531. PubMed ID: 27423896
[TBL] [Abstract][Full Text] [Related]
13. A fully-automated, robust, and versatile algorithm for long-term budding yeast segmentation and tracking.
Wood NE; Doncic A
PLoS One; 2019; 14(3):e0206395. PubMed ID: 30917124
[TBL] [Abstract][Full Text] [Related]
14. Automated analysis of time-lapse fluorescence microscopy images: from live cell images to intracellular foci.
Dzyubachyk O; Essers J; van Cappellen WA; Baldeyron C; Inagaki A; Niessen WJ; Meijering E
Bioinformatics; 2010 Oct; 26(19):2424-30. PubMed ID: 20702399
[TBL] [Abstract][Full Text] [Related]
15. Improved detection of soma location and morphology in fluorescence microscopy images of neurons.
Kayasandik CB; Labate D
J Neurosci Methods; 2016 Dec; 274():61-70. PubMed ID: 27688018
[TBL] [Abstract][Full Text] [Related]
16. Morphologically constrained and data informed cell segmentation of budding yeast.
Bakker E; Swain PS; Crane MM
Bioinformatics; 2018 Jan; 34(1):88-96. PubMed ID: 28968663
[TBL] [Abstract][Full Text] [Related]
17. Bright field microscopy as an alternative to whole cell fluorescence in automated analysis of macrophage images.
Selinummi J; Ruusuvuori P; Podolsky I; Ozinsky A; Gold E; Yli-Harja O; Aderem A; Shmulevich I
PLoS One; 2009 Oct; 4(10):e7497. PubMed ID: 19847301
[TBL] [Abstract][Full Text] [Related]
18. EllipTrack: A Global-Local Cell-Tracking Pipeline for 2D Fluorescence Time-Lapse Microscopy.
Tian C; Yang C; Spencer SL
Cell Rep; 2020 Aug; 32(5):107984. PubMed ID: 32755578
[TBL] [Abstract][Full Text] [Related]
19. Segmentation of yeast cell's bright-field image with an edge-tracing algorithm.
Wang L; Li S; Sun Z; Wen G; Zheng F; Fu C; Li H
J Biomed Opt; 2018 Nov; 23(11):1-7. PubMed ID: 30456935
[TBL] [Abstract][Full Text] [Related]
20. Automated segmentation of brain cells for clonal analyses in fluorescence microscopy images.
Salvi M; Cerrato V; Buffo A; Molinari F
J Neurosci Methods; 2019 Sep; 325():108348. PubMed ID: 31283938
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]