BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

174 related articles for article (PubMed ID: 19864414)

  • 1. Heme ligand binding properties and intradimer interactions in the full-length sensor protein dos from Escherichia coli and its isolated heme domain.
    Lechauve C; Bouzhir-Sima L; Yamashita T; Marden MC; Vos MH; Liebl U; Kiger L
    J Biol Chem; 2009 Dec; 284(52):36146-36159. PubMed ID: 19864414
    [TBL] [Abstract][Full Text] [Related]  

  • 2. The FG loop of a heme-based gas sensor enzyme, Ec DOS, functions in heme binding, autoxidation and catalysis.
    Ito S; Igarashi J; Shimizu T
    J Inorg Biochem; 2009 Oct; 103(10):1380-5. PubMed ID: 19712978
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Ligand binding to the Fe(III)-protoporphyrin IX complex of phosphodiesterase from Escherichia coli (Ec DOS) markedly enhances catalysis of cyclic di-GMP: roles of Met95, Arg97, and Phe113 of the putative heme distal side in catalytic regulation and ligand binding.
    Tanaka A; Shimizu T
    Biochemistry; 2008 Dec; 47(50):13438-46. PubMed ID: 19053256
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Binding of oxygen and carbon monoxide to a heme-regulated phosphodiesterase from Escherichia coli. Kinetics and infrared spectra of the full-length wild-type enzyme, isolated PAS domain, and Met-95 mutants.
    Taguchi S; Matsui T; Igarashi J; Sasakura Y; Araki Y; Ito O; Sugiyama S; Sagami I; Shimizu T
    J Biol Chem; 2004 Jan; 279(5):3340-7. PubMed ID: 14612459
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Arg97 at the heme-distal side of the isolated heme-bound PAS domain of a heme-based oxygen sensor from Escherichia coli (Ec DOS) plays critical roles in autoxidation and binding to gases, particularly O2.
    Ishitsuka Y; Araki Y; Tanaka A; Igarashi J; Ito O; Shimizu T
    Biochemistry; 2008 Aug; 47(34):8874-84. PubMed ID: 18672892
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Role of Phe113 at the distal side of the heme domain of an oxygen-sensor (Ec DOS) in the characterization of the heme environment.
    Ito S; Araki Y; Tanaka A; Igarashi J; Wada T; Shimizu T
    J Inorg Biochem; 2009 Jul; 103(7):989-96. PubMed ID: 19482359
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Critical role of the heme axial ligand, Met95, in locking catalysis of the phosphodiesterase from Escherichia coli (Ec DOS) toward Cyclic diGMP.
    Tanaka A; Takahashi H; Shimizu T
    J Biol Chem; 2007 Jul; 282(29):21301-7. PubMed ID: 17535805
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Roles of Arg-97 and Phe-113 in regulation of distal ligand binding to heme in the sensor domain of Ec DOS protein. Resonance Raman and mutation study.
    El-Mashtoly SF; Nakashima S; Tanaka A; Shimizu T; Kitagawa T
    J Biol Chem; 2008 Jul; 283(27):19000-10. PubMed ID: 18450754
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Stationary and time-resolved resonance Raman spectra of His77 and Met95 mutants of the isolated heme domain of a direct oxygen sensor from Escherichia coli.
    Sato A; Sasakura Y; Sugiyama S; Sagami I; Shimizu T; Mizutani Y; Kitagawa T
    J Biol Chem; 2002 Sep; 277(36):32650-8. PubMed ID: 12080073
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Catalysis and oxygen binding of Ec DOS: a haem-based oxygen-sensor enzyme from Escherichia coli.
    Kobayashi K; Tanaka A; Takahashi H; Igarashi J; Ishitsuka Y; Yokota N; Shimizu T
    J Biochem; 2010 Dec; 148(6):693-703. PubMed ID: 20861024
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Ultraviolet resonance Raman evidence for utilization of the heme 6-propionate hydrogen-bond network in signal transmission from heme to protein in Ec DOS protein.
    El-Mashtoly SF; Takahashi H; Shimizu T; Kitagawa T
    J Am Chem Soc; 2007 Mar; 129(12):3556-63. PubMed ID: 17335280
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Ligand dynamics and early signaling events in the heme domain of the sensor protein Dos from Escherichia coli.
    Yamashita T; Bouzhir-Sima L; Lambry JC; Liebl U; Vos MH
    J Biol Chem; 2008 Jan; 283(4):2344-52. PubMed ID: 18039668
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Ligand binding dynamics to the heme domain of the oxygen sensor Dos from Escherichia coli.
    Liebl U; Bouzhir-Sima L; Kiger L; Marden MC; Lambry JC; Négrerie M; Vos MH
    Biochemistry; 2003 Jun; 42(21):6527-35. PubMed ID: 12767236
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Relationships between heme incorporation, tetramer formation, and catalysis of a heme-regulated phosphodiesterase from Escherichia coli: a study of deletion and site-directed mutants.
    Yoshimura T; Sagami I; Sasakura Y; Shimizu T
    J Biol Chem; 2003 Dec; 278(52):53105-11. PubMed ID: 14551206
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Conversion of a heme-based oxygen sensor to a heme oxygenase by hydrogen sulfide: effects of mutations in the heme distal side of a heme-based oxygen sensor phosphodiesterase (Ec DOS).
    Du Y; Liu G; Yan Y; Huang D; Luo W; Martinkova M; Man P; Shimizu T
    Biometals; 2013 Oct; 26(5):839-52. PubMed ID: 23736976
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Insights into signal transduction involving PAS domain oxygen-sensing heme proteins from the X-ray crystal structure of Escherichia coli Dos heme domain (Ec DosH).
    Park H; Suquet C; Satterlee JD; Kang C
    Biochemistry; 2004 Mar; 43(10):2738-46. PubMed ID: 15005609
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Heme-Edge Residues Modulate Signal Transduction within a Bifunctional Homo-Dimeric Sensor Protein.
    Patterson DC; Liu Y; Das S; Yennawar NH; Armache JP; Kincaid JR; Weinert EE
    Biochemistry; 2021 Dec; 60(49):3801-3812. PubMed ID: 34843212
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Important roles of Tyr43 at the putative heme distal side in the oxygen recognition and stability of the Fe(II)-O2 complex of YddV, a globin-coupled heme-based oxygen sensor diguanylate cyclase.
    Kitanishi K; Kobayashi K; Kawamura Y; Ishigami I; Ogura T; Nakajima K; Igarashi J; Tanaka A; Shimizu T
    Biochemistry; 2010 Dec; 49(49):10381-93. PubMed ID: 21067162
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Dos, a heme-binding PAS protein from Escherichia coli, is a direct oxygen sensor.
    Delgado-Nixon VM; Gonzalez G; Gilles-Gonzalez MA
    Biochemistry; 2000 Mar; 39(10):2685-91. PubMed ID: 10704219
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Pressure effects reveal that changes in the redox states of the heme iron complexes in the sensor domains of two heme-based oxygen sensor proteins, EcDOS and YddV, have profound effects on their flexibility.
    Anzenbacher P; Marchal S; Palacký J; Anzenbacherová E; Domaschke T; Lange R; Shimizu T; Kitanishi K; Stranava M; Stiborová M; Martinkova M
    FEBS J; 2014 Dec; 281(23):5208-19. PubMed ID: 25238584
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 9.