119 related articles for article (PubMed ID: 19883058)
1. Top-down identification of protein biomarkers in bacteria with unsequenced genomes.
Wynne C; Fenselau C; Demirev PA; Edwards N
Anal Chem; 2009 Dec; 81(23):9633-42. PubMed ID: 19883058
[TBL] [Abstract][Full Text] [Related]
2. Composite sequence proteomic analysis of protein biomarkers of Campylobacter coli, C. lari and C. concisus for bacterial identification.
Fagerquist CK; Yee E; Miller WG
Analyst; 2007 Oct; 132(10):1010-23. PubMed ID: 17893805
[TBL] [Abstract][Full Text] [Related]
3. Phyloproteomic classification of unsequenced organisms by top-down identification of bacterial proteins using capLC-MS/MS on an Orbitrap.
Wynne C; Edwards NJ; Fenselau C
Proteomics; 2010 Oct; 10(20):3631-43. PubMed ID: 20845332
[TBL] [Abstract][Full Text] [Related]
4. MALDI-TOF/TOF de novo sequence analysis of 2-D PAGE-separated proteins from Halorhodospira halophila, a bacterium with unsequenced genome.
Samyn B; Sergeant K; Memmi S; Debyser G; Devreese B; Van Beeumen J
Electrophoresis; 2006 Jul; 27(13):2702-11. PubMed ID: 16739227
[TBL] [Abstract][Full Text] [Related]
5. Strain-resolved community proteomics reveals recombining genomes of acidophilic bacteria.
Lo I; Denef VJ; Verberkmoes NC; Shah MB; Goltsman D; DiBartolo G; Tyson GW; Allen EE; Ram RJ; Detter JC; Richardson P; Thelen MP; Hettich RL; Banfield JF
Nature; 2007 Mar; 446(7135):537-41. PubMed ID: 17344860
[TBL] [Abstract][Full Text] [Related]
6. Top-down proteomics for rapid identification of intact microorganisms.
Demirev PA; Feldman AB; Kowalski P; Lin JS
Anal Chem; 2005 Nov; 77(22):7455-61. PubMed ID: 16285700
[TBL] [Abstract][Full Text] [Related]
7. Sub-speciating Campylobacter jejuni by proteomic analysis of its protein biomarkers and their post-translational modifications.
Fagerquist CK; Bates AH; Heath S; King BC; Garbus BR; Harden LA; Miller WG
J Proteome Res; 2006 Oct; 5(10):2527-38. PubMed ID: 17022624
[TBL] [Abstract][Full Text] [Related]
8. A simple intact protein analysis by MALDI-MS for characterization of ribosomal proteins of two genome-sequenced lactic acid bacteria and verification of their amino acid sequences.
Teramoto K; Sato H; Sun L; Torimura M; Tao H
J Proteome Res; 2007 Oct; 6(10):3899-907. PubMed ID: 17854216
[TBL] [Abstract][Full Text] [Related]
9. Amino acid sequence determination of protein biomarkers of Campylobacter upsaliensis and C. helveticus by "composite" sequence proteomic analysis.
Fagerquist CK
J Proteome Res; 2007 Jul; 6(7):2539-49. PubMed ID: 17508732
[TBL] [Abstract][Full Text] [Related]
10. Phylogenetic classification of Pseudomonas putida strains by MALDI-MS using ribosomal subunit proteins as biomarkers.
Teramoto K; Sato H; Sun L; Torimura M; Tao H; Yoshikawa H; Hotta Y; Hosoda A; Tamura H
Anal Chem; 2007 Nov; 79(22):8712-9. PubMed ID: 17939647
[TBL] [Abstract][Full Text] [Related]
11. Mass spectrometry-based proteomics combined with bioinformatic tools for bacterial classification.
Dworzanski JP; Deshpande SV; Chen R; Jabbour RE; Snyder AP; Wick CH; Li L
J Proteome Res; 2006 Jan; 5(1):76-87. PubMed ID: 16396497
[TBL] [Abstract][Full Text] [Related]
12. Expanding the organismal scope of proteomics: cross-species protein identification by mass spectrometry and its implications.
Liska AJ; Shevchenko A
Proteomics; 2003 Jan; 3(1):19-28. PubMed ID: 12548630
[TBL] [Abstract][Full Text] [Related]
13. Genomic and proteomic identification of a DNA-binding protein used in the "fingerprinting" of campylobacter species and strains by MALDI-TOF-MS protein biomarker analysis.
Fagerquist CK; Miller WG; Harden LA; Bates AH; Vensel WH; Wang G; Mandrell RE
Anal Chem; 2005 Aug; 77(15):4897-907. PubMed ID: 16053303
[TBL] [Abstract][Full Text] [Related]
14. Sequence similarity-driven proteomics in organisms with unknown genomes by LC-MS/MS and automated de novo sequencing.
Waridel P; Frank A; Thomas H; Surendranath V; Sunyaev S; Pevzner P; Shevchenko A
Proteomics; 2007 Jul; 7(14):2318-29. PubMed ID: 17623296
[TBL] [Abstract][Full Text] [Related]
15. Classification and identification of bacteria using mass spectrometry-based proteomics.
Dworzanski JP; Snyder AP
Expert Rev Proteomics; 2005 Dec; 2(6):863-78. PubMed ID: 16307516
[TBL] [Abstract][Full Text] [Related]
16. Classical proteomics: two-dimensional electrophoresis/MALDI mass spectrometry.
Zimny-Arndt U; Schmid M; Ackermann R; Jungblut PR
Methods Mol Biol; 2009; 492():65-91. PubMed ID: 19241027
[TBL] [Abstract][Full Text] [Related]
17. A top-down proteomics approach for differentiating thermal resistant strains of Enterobacter sakazakii.
Williams TL; Monday SR; Edelson-Mammel S; Buchanan R; Musser SM
Proteomics; 2005 Nov; 5(16):4161-9. PubMed ID: 16196092
[TBL] [Abstract][Full Text] [Related]
18. Exopolysaccharide-associated protein sorting in environmental organisms: the PEP-CTERM/EpsH system. Application of a novel phylogenetic profiling heuristic.
Haft DH; Paulsen IT; Ward N; Selengut JD
BMC Biol; 2006 Aug; 4():29. PubMed ID: 16930487
[TBL] [Abstract][Full Text] [Related]
19. Characterization of ribosomal proteins as biomarkers for matrix-assisted laser desorption/ionization mass spectral identification of Lactobacillus plantarum.
Sun L; Teramoto K; Sato H; Torimura M; Tao H; Shintani T
Rapid Commun Mass Spectrom; 2006; 20(24):3789-98. PubMed ID: 17120274
[TBL] [Abstract][Full Text] [Related]
20. Proteomic analysis of the cyanobacterium of the Azolla symbiosis: identity, adaptation, and NifH modification.
Ekman M; Tollbäck P; Bergman B
J Exp Bot; 2008; 59(5):1023-34. PubMed ID: 18065763
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]