These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.
26. Computational approaches to the topology, stability and dynamics of metabolic networks. Steuer R Phytochemistry; 2007; 68(16-18):2139-51. PubMed ID: 17574639 [TBL] [Abstract][Full Text] [Related]
27. Scaffold proteins confer diverse regulatory properties to protein kinase cascades. Locasale JW; Shaw AS; Chakraborty AK Proc Natl Acad Sci U S A; 2007 Aug; 104(33):13307-12. PubMed ID: 17686969 [TBL] [Abstract][Full Text] [Related]
29. Protein conformational transitions coupled to binding in molecular recognition of unstructured proteins: deciphering the effect of intermolecular interactions on computational structure prediction of the p27Kip1 protein bound to the cyclin A-cyclin-dependent kinase 2 complex. Verkhivker GM Proteins; 2005 Feb; 58(3):706-16. PubMed ID: 15609350 [TBL] [Abstract][Full Text] [Related]
30. Dynamic partitioning for hybrid simulation of the bistable HIV-1 transactivation network. Griffith M; Courtney T; Peccoud J; Sanders WH Bioinformatics; 2006 Nov; 22(22):2782-9. PubMed ID: 16954141 [TBL] [Abstract][Full Text] [Related]
31. Monte Carlo sampling and principal component analysis of flux distributions yield topological and modular information on metabolic networks. Sariyar B; Perk S; Akman U; Hortaçsu A J Theor Biol; 2006 Sep; 242(2):389-400. PubMed ID: 16860341 [TBL] [Abstract][Full Text] [Related]
32. Binomial tau-leap spatial stochastic simulation algorithm for applications in chemical kinetics. Marquez-Lago TT; Burrage K J Chem Phys; 2007 Sep; 127(10):104101. PubMed ID: 17867731 [TBL] [Abstract][Full Text] [Related]
33. Characterization of protein-folding pathways by reduced-space modeling. Kmiecik S; Kolinski A Proc Natl Acad Sci U S A; 2007 Jul; 104(30):12330-5. PubMed ID: 17636132 [TBL] [Abstract][Full Text] [Related]
34. Causal inference in biomolecular pathways using a Bayesian network approach and an Implicit method. Ben Hassen H; Masmoudi A; Rebai A J Theor Biol; 2008 Aug; 253(4):717-24. PubMed ID: 18541271 [TBL] [Abstract][Full Text] [Related]
35. A model of TLR4 signaling and tolerance using a qualitative, particle-event-based method: introduction of spatially configured stochastic reaction chambers (SCSRC). An G Math Biosci; 2009 Jan; 217(1):43-52. PubMed ID: 18950646 [TBL] [Abstract][Full Text] [Related]
36. Modeling the signaling endosome hypothesis: why a drive to the nucleus is better than a (random) walk. Howe CL Theor Biol Med Model; 2005 Oct; 2():43. PubMed ID: 16236165 [TBL] [Abstract][Full Text] [Related]
37. From reaction networks to information flow--using modular response analysis to track information in signaling networks. Schulthess P; Blüthgen N Methods Enzymol; 2011; 500():397-409. PubMed ID: 21943908 [TBL] [Abstract][Full Text] [Related]
38. Noise and critical phenomena in biochemical signaling cycles at small molecule numbers. Metzner C; Sajitz-Hermstein M; Schmidberger M; Fabry B Phys Rev E Stat Nonlin Soft Matter Phys; 2009 Aug; 80(2 Pt 1):021915. PubMed ID: 19792159 [TBL] [Abstract][Full Text] [Related]
39. Computationally Efficient Modelling of Stochastic Spatio-Temporal Dynamics in Biomolecular Networks. Kim J; Foo M; Bates DG Sci Rep; 2018 Feb; 8(1):3498. PubMed ID: 29472589 [TBL] [Abstract][Full Text] [Related]
40. Confinement and diffusion modulate bistability and stochastic switching in a reaction network with positive feedback. Mlynarczyk PJ; Pullen RH; Abel SM J Chem Phys; 2016 Jan; 144(1):015102. PubMed ID: 26747820 [TBL] [Abstract][Full Text] [Related] [Previous] [Next] [New Search]