353 related articles for article (PubMed ID: 19906696)
1. MBD-isolated Genome Sequencing provides a high-throughput and comprehensive survey of DNA methylation in the human genome.
Serre D; Lee BH; Ting AH
Nucleic Acids Res; 2010 Jan; 38(2):391-9. PubMed ID: 19906696
[TBL] [Abstract][Full Text] [Related]
2. Comparison of methyl-DNA immunoprecipitation (MeDIP) and methyl-CpG binding domain (MBD) protein capture for genome-wide DNA methylation analysis reveal CpG sequence coverage bias.
Nair SS; Coolen MW; Stirzaker C; Song JZ; Statham AL; Strbenac D; Robinson MD; Clark SJ
Epigenetics; 2011 Jan; 6(1):34-44. PubMed ID: 20818161
[TBL] [Abstract][Full Text] [Related]
3. Identification of methylated regions with peak search based on Poisson model from massively parallel methylated DNA immunoprecipitation-sequencing data.
Yang Y; Wang W; Li Y; Tu J; Bai Y; Xiao P; Zhang D; Lu Z
Electrophoresis; 2010 Oct; 31(21):3537-44. PubMed ID: 20925052
[TBL] [Abstract][Full Text] [Related]
4. High definition profiling of mammalian DNA methylation by array capture and single molecule bisulfite sequencing.
Hodges E; Smith AD; Kendall J; Xuan Z; Ravi K; Rooks M; Zhang MQ; Ye K; Bhattacharjee A; Brizuela L; McCombie WR; Wigler M; Hannon GJ; Hicks JB
Genome Res; 2009 Sep; 19(9):1593-605. PubMed ID: 19581485
[TBL] [Abstract][Full Text] [Related]
5. Combining MeDIP-seq and MRE-seq to investigate genome-wide CpG methylation.
Li D; Zhang B; Xing X; Wang T
Methods; 2015 Jan; 72():29-40. PubMed ID: 25448294
[TBL] [Abstract][Full Text] [Related]
6. Methyl-CpG-Binding Domain Sequencing: MBD-seq.
Aberg KA; Chan RF; Xie L; Shabalin AA; van den Oord EJCG
Methods Mol Biol; 2018; 1708():171-189. PubMed ID: 29224145
[TBL] [Abstract][Full Text] [Related]
7. Genome-wide DNA methylation maps in follicular lymphoma cells determined by methylation-enriched bisulfite sequencing.
Choi JH; Li Y; Guo J; Pei L; Rauch TA; Kramer RS; Macmil SL; Wiley GB; Bennett LB; Schnabel JL; Taylor KH; Kim S; Xu D; Sreekumar A; Pfeifer GP; Roe BA; Caldwell CW; Bhalla KN; Shi H
PLoS One; 2010 Sep; 5(9):. PubMed ID: 20927367
[TBL] [Abstract][Full Text] [Related]
8. BSmooth: from whole genome bisulfite sequencing reads to differentially methylated regions.
Hansen KD; Langmead B; Irizarry RA
Genome Biol; 2012 Oct; 13(10):R83. PubMed ID: 23034175
[TBL] [Abstract][Full Text] [Related]
9. Chromosome-wide mapping of DNA methylation patterns in normal and malignant prostate cells reveals pervasive methylation of gene-associated and conserved intergenic sequences.
Yegnasubramanian S; Wu Z; Haffner MC; Esopi D; Aryee MJ; Badrinath R; He TL; Morgan JD; Carvalho B; Zheng Q; De Marzo AM; Irizarry RA; Nelson WG
BMC Genomics; 2011 Jun; 12():313. PubMed ID: 21669002
[TBL] [Abstract][Full Text] [Related]
10. Differential recruitment of methylated CpG binding domains by the orphan receptor GCNF initiates the repression and silencing of Oct4 expression.
Gu P; Le Menuet D; Chung AC; Cooney AJ
Mol Cell Biol; 2006 Dec; 26(24):9471-83. PubMed ID: 17030610
[TBL] [Abstract][Full Text] [Related]
11. Methyl-CpG-binding protein MBD2 plays a key role in maintenance and spread of DNA methylation at CpG islands and shores in cancer.
Stirzaker C; Song JZ; Ng W; Du Q; Armstrong NJ; Locke WJ; Statham AL; French H; Pidsley R; Valdes-Mora F; Zotenko E; Clark SJ
Oncogene; 2017 Mar; 36(10):1328-1338. PubMed ID: 27593931
[TBL] [Abstract][Full Text] [Related]
12. Identification of a novel differentially methylated region adjacent to
Bai H; He Y; Lin Y; Leng Q; Carrillo JA; Liu J; Jiang F; Chen J; Song J
Genome; 2021 May; 64(5):533-546. PubMed ID: 33113339
[TBL] [Abstract][Full Text] [Related]
13. Investigation of genomic methylation status using methylation-specific and bisulfite sequencing polymerase chain reaction.
Carless MA
Methods Mol Biol; 2015; 1288():193-212. PubMed ID: 25827881
[TBL] [Abstract][Full Text] [Related]
14. Whole-genome DNA methylation profiling using MethylCap-seq.
Brinkman AB; Simmer F; Ma K; Kaan A; Zhu J; Stunnenberg HG
Methods; 2010 Nov; 52(3):232-6. PubMed ID: 20542119
[TBL] [Abstract][Full Text] [Related]
15. Targeted DNA methylation analysis by next-generation sequencing.
Masser DR; Stanford DR; Freeman WM
J Vis Exp; 2015 Feb; (96):. PubMed ID: 25741966
[TBL] [Abstract][Full Text] [Related]
16. Global DNA methylation profiling reveals new insights into epigenetically deregulated protein coding and long noncoding RNAs in CLL.
Subhash S; Andersson PO; Kosalai ST; Kanduri C; Kanduri M
Clin Epigenetics; 2016; 8():106. PubMed ID: 27777635
[TBL] [Abstract][Full Text] [Related]
17. High-throughput bisulfite sequencing in mammalian genomes.
Smith ZD; Gu H; Bock C; Gnirke A; Meissner A
Methods; 2009 Jul; 48(3):226-32. PubMed ID: 19442738
[TBL] [Abstract][Full Text] [Related]
18. Genome-wide analysis and modeling of DNA methylation susceptibility in 30 breast cancer cell lines by using CpG flanking sequences.
An J; Kim K; Rhee SM; Chae H; Nephew KP; Kim S
J Bioinform Comput Biol; 2013 Jun; 11(3):1341003. PubMed ID: 23796180
[TBL] [Abstract][Full Text] [Related]
19. An improved method for genome wide DNA methylation profiling correlated to transcription and genomic instability in two breast cancer cell lines.
Li J; Gao F; Li N; Li S; Yin G; Tian G; Jia S; Wang K; Zhang X; Yang H; Nielsen AL; Bolund L
BMC Genomics; 2009 May; 10():223. PubMed ID: 19439076
[TBL] [Abstract][Full Text] [Related]
20. Investigation of genomic methylation status using methylation-specific and bisulfite sequencing polymerase chain reaction.
Carless M
Methods Mol Biol; 2009; 523():217-34. PubMed ID: 19381936
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]