151 related articles for article (PubMed ID: 19908365)
1. Local optimization for global alignment of protein interaction networks.
Chindelevitch L; Liao CS; Berger B
Pac Symp Biocomput; 2010; ():123-32. PubMed ID: 19908365
[TBL] [Abstract][Full Text] [Related]
2. Pairwise alignment of protein interaction networks.
Koyutürk M; Kim Y; Topkara U; Subramaniam S; Szpankowski W; Grama A
J Comput Biol; 2006 Mar; 13(2):182-99. PubMed ID: 16597234
[TBL] [Abstract][Full Text] [Related]
3. Optimizing a global alignment of protein interaction networks.
Chindelevitch L; Ma CY; Liao CS; Berger B
Bioinformatics; 2013 Nov; 29(21):2765-73. PubMed ID: 24048352
[TBL] [Abstract][Full Text] [Related]
4. Geometric evolutionary dynamics of protein interaction networks.
Przulj N; Kuchaiev O; Stevanović A; Hayes W
Pac Symp Biocomput; 2010; ():178-89. PubMed ID: 19908370
[TBL] [Abstract][Full Text] [Related]
5. Global alignment of multiple protein interaction networks.
Singh R; Xu J; Berger B
Pac Symp Biocomput; 2008; ():303-14. PubMed ID: 18229695
[TBL] [Abstract][Full Text] [Related]
6. Global Network Alignment in the Context of Aging.
Faisal FE; Zhao H; Milenkovic T
IEEE/ACM Trans Comput Biol Bioinform; 2015; 12(1):40-52. PubMed ID: 26357077
[TBL] [Abstract][Full Text] [Related]
7. Global alignment of multiple protein interaction networks with application to functional orthology detection.
Singh R; Xu J; Berger B
Proc Natl Acad Sci U S A; 2008 Sep; 105(35):12763-8. PubMed ID: 18725631
[TBL] [Abstract][Full Text] [Related]
8. LePrimAlign: local entropy-based alignment of PPI networks to predict conserved modules.
Maskey S; Cho YR
BMC Genomics; 2019 Dec; 20(Suppl 9):964. PubMed ID: 31874635
[TBL] [Abstract][Full Text] [Related]
9. Global multiple protein-protein interaction network alignment by combining pairwise network alignments.
Dohrmann J; Puchin J; Singh R
BMC Bioinformatics; 2015; 16 Suppl 13(Suppl 13):S11. PubMed ID: 26423128
[TBL] [Abstract][Full Text] [Related]
10. Conserved patterns of protein interaction in multiple species.
Sharan R; Suthram S; Kelley RM; Kuhn T; McCuine S; Uetz P; Sittler T; Karp RM; Ideker T
Proc Natl Acad Sci U S A; 2005 Feb; 102(6):1974-9. PubMed ID: 15687504
[TBL] [Abstract][Full Text] [Related]
11. Systems biology approach reveals possible evolutionarily conserved moonlighting functions for enolase.
Paludo GP; Lorenzatto KR; Bonatto D; Ferreira HB
Comput Biol Chem; 2015 Oct; 58():1-8. PubMed ID: 25978602
[TBL] [Abstract][Full Text] [Related]
12. Global alignment of protein-protein interaction networks.
Mongiovì M; Sharan R
Methods Mol Biol; 2013; 939():21-34. PubMed ID: 23192538
[TBL] [Abstract][Full Text] [Related]
13. Evolutionary rate in the protein interaction network.
Fraser HB; Hirsh AE; Steinmetz LM; Scharfe C; Feldman MW
Science; 2002 Apr; 296(5568):750-2. PubMed ID: 11976460
[TBL] [Abstract][Full Text] [Related]
14. GreedyPlus: An Algorithm for the Alignment of Interface Interaction Networks.
Law B; Bader GD
Sci Rep; 2015 Jul; 5():12074. PubMed ID: 26165520
[TBL] [Abstract][Full Text] [Related]
15. Protein interaction networks of Saccharomyces cerevisiae, Caenorhabditis elegans and Drosophila melanogaster: large-scale organization and robustness.
Li D; Li J; Ouyang S; Wang J; Wu S; Wan P; Zhu Y; Xu X; He F
Proteomics; 2006 Jan; 6(2):456-61. PubMed ID: 16317777
[TBL] [Abstract][Full Text] [Related]
16. SAlign-a structure aware method for global PPI network alignment.
Ayub U; Haider I; Naveed H
BMC Bioinformatics; 2020 Nov; 21(1):500. PubMed ID: 33148180
[TBL] [Abstract][Full Text] [Related]
17. An Adaptive Hybrid Algorithm for Global Network Alignment.
Xie J; Xiang C; Ma J; Tan J; Wen T; Lei J; Nie Q
IEEE/ACM Trans Comput Biol Bioinform; 2016; 13(3):483-93. PubMed ID: 27295633
[TBL] [Abstract][Full Text] [Related]
18. Global Biological Network Alignment by Using Efficient Memetic Algorithm.
Maoguo Gong ; Zhenglin Peng ; Lijia Ma ; Jiaxiang Huang
IEEE/ACM Trans Comput Biol Bioinform; 2016 Nov; 13(6):1117-1129. PubMed ID: 28055895
[TBL] [Abstract][Full Text] [Related]
19. Evolution and topology in the yeast protein interaction network.
Wuchty S
Genome Res; 2004 Jul; 14(7):1310-4. PubMed ID: 15231746
[TBL] [Abstract][Full Text] [Related]
20. A novel algorithm for alignment of multiple PPI networks based on simulated annealing.
Hu J; He J; Li J; Gao Y; Zheng Y; Shang X
BMC Genomics; 2019 Dec; 20(Suppl 13):932. PubMed ID: 31881842
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]