215 related articles for article (PubMed ID: 19910494)
21. The functional consequences of variation in transcription factor binding.
Cusanovich DA; Pavlovic B; Pritchard JK; Gilad Y
PLoS Genet; 2014 Mar; 10(3):e1004226. PubMed ID: 24603674
[TBL] [Abstract][Full Text] [Related]
22. Transcriptional regulators form diverse groups with context-dependent regulatory functions.
Stampfel G; Kazmar T; Frank O; Wienerroither S; Reiter F; Stark A
Nature; 2015 Dec; 528(7580):147-51. PubMed ID: 26550828
[TBL] [Abstract][Full Text] [Related]
23. Pioneer factors: directing transcriptional regulators within the chromatin environment.
Magnani L; Eeckhoute J; Lupien M
Trends Genet; 2011 Nov; 27(11):465-74. PubMed ID: 21885149
[TBL] [Abstract][Full Text] [Related]
24. Modeling gene regulation from paired expression and chromatin accessibility data.
Duren Z; Chen X; Jiang R; Wang Y; Wong WH
Proc Natl Acad Sci U S A; 2017 Jun; 114(25):E4914-E4923. PubMed ID: 28576882
[TBL] [Abstract][Full Text] [Related]
25. Organizing combinatorial transcription factor recruitment at cis-regulatory modules.
Dubois-Chevalier J; Mazrooei P; Lupien M; Staels B; Lefebvre P; Eeckhoute J
Transcription; 2018; 9(4):233-239. PubMed ID: 29105538
[TBL] [Abstract][Full Text] [Related]
26. Canonical and single-cell Hi-C reveal distinct chromatin interaction sub-networks of mammalian transcription factors.
Ma X; Ezer D; Adryan B; Stevens TJ
Genome Biol; 2018 Oct; 19(1):174. PubMed ID: 30359306
[TBL] [Abstract][Full Text] [Related]
27. Roles of lineage-determining transcription factors in establishing open chromatin: lessons from high-throughput studies.
Heinz S; Glass CK
Curr Top Microbiol Immunol; 2012; 356():1-15. PubMed ID: 21744305
[TBL] [Abstract][Full Text] [Related]
28. Mocap: large-scale inference of transcription factor binding sites from chromatin accessibility.
Chen X; Yu B; Carriero N; Silva C; Bonneau R
Nucleic Acids Res; 2017 May; 45(8):4315-4329. PubMed ID: 28334916
[TBL] [Abstract][Full Text] [Related]
29. Promoter or enhancer, what's the difference? Deconstruction of established distinctions and presentation of a unifying model.
Andersson R
Bioessays; 2015 Mar; 37(3):314-23. PubMed ID: 25450156
[TBL] [Abstract][Full Text] [Related]
30. [Methods of studying transcriptional regulation of gene expression].
Abe T
Nihon Rinsho; 1996 Feb; 54(2):316-21. PubMed ID: 8838075
[TBL] [Abstract][Full Text] [Related]
31. Transcription factor interactions in genomic nuclear receptor function.
George CL; Lightman SL; Biddie SC
Epigenomics; 2011 Aug; 3(4):471-85. PubMed ID: 22126206
[TBL] [Abstract][Full Text] [Related]
32. Mechanisms of Interplay between Transcription Factors and the 3D Genome.
Kim S; Shendure J
Mol Cell; 2019 Oct; 76(2):306-319. PubMed ID: 31521504
[TBL] [Abstract][Full Text] [Related]
33. coTRaCTE predicts co-occurring transcription factors within cell-type specific enhancers.
van Bömmel A; Love MI; Chung HR; Vingron M
PLoS Comput Biol; 2018 Aug; 14(8):e1006372. PubMed ID: 30142147
[TBL] [Abstract][Full Text] [Related]
34. Enhancer Features that Drive Formation of Transcriptional Condensates.
Shrinivas K; Sabari BR; Coffey EL; Klein IA; Boija A; Zamudio AV; Schuijers J; Hannett NM; Sharp PA; Young RA; Chakraborty AK
Mol Cell; 2019 Aug; 75(3):549-561.e7. PubMed ID: 31398323
[TBL] [Abstract][Full Text] [Related]
35. Emerging insights into enhancer biology and function.
Arnold M; Stengel KR
Transcription; 2023 Nov; 14(1-2):68-87. PubMed ID: 37312570
[TBL] [Abstract][Full Text] [Related]
36. Deciphering the multi-scale, quantitative cis-regulatory code.
Kim S; Wysocka J
Mol Cell; 2023 Feb; 83(3):373-392. PubMed ID: 36693380
[TBL] [Abstract][Full Text] [Related]
37. Enhancer modeling uncovers transcriptional signatures of individual cardiac cell states in Drosophila.
Busser BW; Haimovich J; Huang D; Ovcharenko I; Michelson AM
Nucleic Acids Res; 2015 Feb; 43(3):1726-39. PubMed ID: 25609699
[TBL] [Abstract][Full Text] [Related]
38. On the relation between promoter divergence and gene expression evolution.
Tirosh I; Weinberger A; Bezalel D; Kaganovich M; Barkai N
Mol Syst Biol; 2008; 4():159. PubMed ID: 18197176
[TBL] [Abstract][Full Text] [Related]
39. Population Variation and Genetic Control of Modular Chromatin Architecture in Humans.
Waszak SM; Delaneau O; Gschwind AR; Kilpinen H; Raghav SK; Witwicki RM; Orioli A; Wiederkehr M; Panousis NI; Yurovsky A; Romano-Palumbo L; Planchon A; Bielser D; Padioleau I; Udin G; Thurnheer S; Hacker D; Hernandez N; Reymond A; Deplancke B; Dermitzakis ET
Cell; 2015 Aug; 162(5):1039-50. PubMed ID: 26300124
[TBL] [Abstract][Full Text] [Related]
40. Regulatory variation within and between species.
Zheng W; Gianoulis TA; Karczewski KJ; Zhao H; Snyder M
Annu Rev Genomics Hum Genet; 2011; 12():327-46. PubMed ID: 21721942
[TBL] [Abstract][Full Text] [Related]
[Previous] [Next] [New Search]
