These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

293 related articles for article (PubMed ID: 19913486)

  • 1. Predicting continuous local structure and the effect of its substitution for secondary structure in fragment-free protein structure prediction.
    Faraggi E; Yang Y; Zhang S; Zhou Y
    Structure; 2009 Nov; 17(11):1515-27. PubMed ID: 19913486
    [TBL] [Abstract][Full Text] [Related]  

  • 2. TANGLE: two-level support vector regression approach for protein backbone torsion angle prediction from primary sequences.
    Song J; Tan H; Wang M; Webb GI; Akutsu T
    PLoS One; 2012; 7(2):e30361. PubMed ID: 22319565
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Protein backbone and sidechain torsion angles predicted from NMR chemical shifts using artificial neural networks.
    Shen Y; Bax A
    J Biomol NMR; 2013 Jul; 56(3):227-41. PubMed ID: 23728592
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Predicting dihedral angle probability distributions for protein coil residues from primary sequence using neural networks.
    Helles G; Fonseca R
    BMC Bioinformatics; 2009 Oct; 10():338. PubMed ID: 19835576
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Ab initio and template-based prediction of multi-class distance maps by two-dimensional recursive neural networks.
    Walsh I; Baù D; Martin AJ; Mooney C; Vullo A; Pollastri G
    BMC Struct Biol; 2009 Jan; 9():5. PubMed ID: 19183478
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Toward an accurate prediction of inter-residue distances in proteins using 2D recursive neural networks.
    Kukic P; Mirabello C; Tradigo G; Walsh I; Veltri P; Pollastri G
    BMC Bioinformatics; 2014 Jan; 15():6. PubMed ID: 24410833
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Fluctuations of backbone torsion angles obtained from NMR-determined structures and their prediction.
    Zhang T; Faraggi E; Zhou Y
    Proteins; 2010 Dec; 78(16):3353-62. PubMed ID: 20818661
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Capturing non-local interactions by long short-term memory bidirectional recurrent neural networks for improving prediction of protein secondary structure, backbone angles, contact numbers and solvent accessibility.
    Heffernan R; Yang Y; Paliwal K; Zhou Y
    Bioinformatics; 2017 Sep; 33(18):2842-2849. PubMed ID: 28430949
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Sixty-five years of the long march in protein secondary structure prediction: the final stretch?
    Yang Y; Gao J; Wang J; Heffernan R; Hanson J; Paliwal K; Zhou Y
    Brief Bioinform; 2018 May; 19(3):482-494. PubMed ID: 28040746
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Hybridized distance- and contact-based hierarchical structure modeling for folding soluble and membrane proteins.
    Roche R; Bhattacharya S; Bhattacharya D
    PLoS Comput Biol; 2021 Feb; 17(2):e1008753. PubMed ID: 33621244
    [TBL] [Abstract][Full Text] [Related]  

  • 11. FragQA: predicting local fragment quality of a sequence-structure alignment.
    Gao X; Bu D; Li SC; Xu J; Li M
    Genome Inform; 2007; 19():27-39. PubMed ID: 18546502
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Real-value prediction of backbone torsion angles.
    Xue B; Dor O; Faraggi E; Zhou Y
    Proteins; 2008 Jul; 72(1):427-33. PubMed ID: 18214956
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Direct prediction of profiles of sequences compatible with a protein structure by neural networks with fragment-based local and energy-based nonlocal profiles.
    Li Z; Yang Y; Faraggi E; Zhan J; Zhou Y
    Proteins; 2014 Oct; 82(10):2565-73. PubMed ID: 24898915
    [TBL] [Abstract][Full Text] [Related]  

  • 14. TALOS+: a hybrid method for predicting protein backbone torsion angles from NMR chemical shifts.
    Shen Y; Delaglio F; Cornilescu G; Bax A
    J Biomol NMR; 2009 Aug; 44(4):213-23. PubMed ID: 19548092
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Real-SPINE: an integrated system of neural networks for real-value prediction of protein structural properties.
    Dor O; Zhou Y
    Proteins; 2007 Jul; 68(1):76-81. PubMed ID: 17397056
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Predicting the errors of predicted local backbone angles and non-local solvent- accessibilities of proteins by deep neural networks.
    Gao J; Yang Y; Zhou Y
    Bioinformatics; 2016 Dec; 32(24):3768-3773. PubMed ID: 27551104
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Predicting residue-residue contact maps by a two-layer, integrated neural-network method.
    Xue B; Faraggi E; Zhou Y
    Proteins; 2009 Jul; 76(1):176-83. PubMed ID: 19137600
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Protein backbone angle prediction with machine learning approaches.
    Kuang R; Leslie CS; Yang AS
    Bioinformatics; 2004 Jul; 20(10):1612-21. PubMed ID: 14988121
    [TBL] [Abstract][Full Text] [Related]  

  • 19. ANGLOR: a composite machine-learning algorithm for protein backbone torsion angle prediction.
    Wu S; Zhang Y
    PLoS One; 2008; 3(10):e3400. PubMed ID: 18923703
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Principles, challenges and advances in ab initio protein structure prediction.
    Jothi A
    Protein Pept Lett; 2012 Nov; 19(11):1194-204. PubMed ID: 22587787
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 15.