These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

183 related articles for article (PubMed ID: 19943962)

  • 1. JANE: efficient mapping of prokaryotic ESTs and variable length sequence reads on related template genomes.
    Liang C; Schmid A; López-Sánchez MJ; Moya A; Gross R; Bernhardt J; Dandekar T
    BMC Bioinformatics; 2009 Nov; 10():391. PubMed ID: 19943962
    [TBL] [Abstract][Full Text] [Related]  

  • 2. e2g: an interactive web-based server for efficiently mapping large EST and cDNA sets to genomic sequences.
    Krüger J; Sczyrba A; Kurtz S; Giegerich R
    Nucleic Acids Res; 2004 Jul; 32(Web Server issue):W301-4. PubMed ID: 15215398
    [TBL] [Abstract][Full Text] [Related]  

  • 3. PESTAS: a web server for EST analysis and sequence mining.
    Nam SH; Kim DW; Jung TS; Choi YS; Kim DW; Choi HS; Choi SH; Park HS
    Bioinformatics; 2009 Jul; 25(14):1846-8. PubMed ID: 19414531
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Gene structure prediction from consensus spliced alignment of multiple ESTs matching the same genomic locus.
    Brendel V; Xing L; Zhu W
    Bioinformatics; 2004 May; 20(7):1157-69. PubMed ID: 14764557
    [TBL] [Abstract][Full Text] [Related]  

  • 5. ESAP plus: a web-based server for EST-SSR marker development.
    Ponyared P; Ponsawat J; Tongsima S; Seresangtakul P; Akkasaeng C; Tantisuwichwong N
    BMC Genomics; 2016 Dec; 17(Suppl 13):1035. PubMed ID: 28155670
    [TBL] [Abstract][Full Text] [Related]  

  • 6. EGassembler: online bioinformatics service for large-scale processing, clustering and assembling ESTs and genomic DNA fragments.
    Masoudi-Nejad A; Tonomura K; Kawashima S; Moriya Y; Suzuki M; Itoh M; Kanehisa M; Endo T; Goto S
    Nucleic Acids Res; 2006 Jul; 34(Web Server issue):W459-62. PubMed ID: 16845049
    [TBL] [Abstract][Full Text] [Related]  

  • 7. ESTMAP: a system for expressed sequence tags mapping on genomic sequences.
    Milanesi L; Rogozin IB
    IEEE Trans Nanobioscience; 2003 Jun; 2(2):75-8. PubMed ID: 15382662
    [TBL] [Abstract][Full Text] [Related]  

  • 8. REGANOR: a gene prediction server for prokaryotic genomes and a database of high quality gene predictions for prokaryotes.
    Linke B; McHardy AC; Neuweger H; Krause L; Meyer F
    Appl Bioinformatics; 2006; 5(3):193-8. PubMed ID: 16922601
    [TBL] [Abstract][Full Text] [Related]  

  • 9. ESTree db: a tool for peach functional genomics.
    Lazzari B; Caprera A; Vecchietti A; Stella A; Milanesi L; Pozzi C
    BMC Bioinformatics; 2005 Dec; 6 Suppl 4(Suppl 4):S16. PubMed ID: 16351742
    [TBL] [Abstract][Full Text] [Related]  

  • 10. ConiferEST: an integrated bioinformatics system for data reprocessing and mining of conifer expressed sequence tags (ESTs).
    Liang C; Wang G; Liu L; Ji G; Fang L; Liu Y; Carter K; Webb JS; Dean JF
    BMC Genomics; 2007 May; 8():134. PubMed ID: 17535431
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Sequencing Medicago truncatula expressed sequenced tags using 454 Life Sciences technology.
    Cheung F; Haas BJ; Goldberg SM; May GD; Xiao Y; Town CD
    BMC Genomics; 2006 Oct; 7():272. PubMed ID: 17062153
    [TBL] [Abstract][Full Text] [Related]  

  • 12. ESTviewer: a web interface for visualizing mouse, rat, cattle, pig and chicken conserved ESTs in human genes and human alternatively spliced variants.
    Chen FC; Chuang TJ
    Bioinformatics; 2005 May; 21(10):2510-3. PubMed ID: 15722373
    [TBL] [Abstract][Full Text] [Related]  

  • 13. PSAT: a web tool to compare genomic neighborhoods of multiple prokaryotic genomes.
    Fong C; Rohmer L; Radey M; Wasnick M; Brittnacher MJ
    BMC Bioinformatics; 2008 Mar; 9():170. PubMed ID: 18366802
    [TBL] [Abstract][Full Text] [Related]  

  • 14. ESTWeb: bioinformatics services for EST sequencing projects.
    Paquola AC; Nishyiama MY; Reis EM; da Silva AM; Verjovski-Almeida S
    Bioinformatics; 2003 Aug; 19(12):1587-8. PubMed ID: 12912845
    [TBL] [Abstract][Full Text] [Related]  

  • 15. The Sequence Analysis and Management System -- SAMS-2.0: data management and sequence analysis adapted to changing requirements from traditional sanger sequencing to ultrafast sequencing technologies.
    Bekel T; Henckel K; Küster H; Meyer F; Mittard Runte V; Neuweger H; Paarmann D; Rupp O; Zakrzewski M; Pühler A; Stoye J; Goesmann A
    J Biotechnol; 2009 Mar; 140(1-2):3-12. PubMed ID: 19297685
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Global assembly of expressed sequence tags.
    Cheung F
    Methods Mol Biol; 2012; 883():193-9. PubMed ID: 22589135
    [TBL] [Abstract][Full Text] [Related]  

  • 17. The Genome Sequencer FLX System--longer reads, more applications, straight forward bioinformatics and more complete data sets.
    Droege M; Hill B
    J Biotechnol; 2008 Aug; 136(1-2):3-10. PubMed ID: 18616967
    [TBL] [Abstract][Full Text] [Related]  

  • 18. GarlicESTdb: an online database and mining tool for garlic EST sequences.
    Kim DW; Jung TS; Nam SH; Kwon HR; Kim A; Chae SH; Choi SH; Kim DW; Kim RN; Park HS
    BMC Plant Biol; 2009 May; 9():61. PubMed ID: 19445732
    [TBL] [Abstract][Full Text] [Related]  

  • 19. EasyCluster2: an improved tool for clustering and assembling long transcriptome reads.
    Bevilacqua V; Pietroleonardo N; Giannino E; Stroppa F; Simone D; Pesole G; Picardi E
    BMC Bioinformatics; 2014; 15 Suppl 15(Suppl 15):S7. PubMed ID: 25474441
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Obtaining accurate translations from expressed sequence tags.
    Wasmuth J; Blaxter M
    Methods Mol Biol; 2009; 533():221-39. PubMed ID: 19277570
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 10.