562 related articles for article (PubMed ID: 19966280)
1. Sequencing newly replicated DNA reveals widespread plasticity in human replication timing.
Hansen RS; Thomas S; Sandstrom R; Canfield TK; Thurman RE; Weaver M; Dorschner MO; Gartler SM; Stamatoyannopoulos JA
Proc Natl Acad Sci U S A; 2010 Jan; 107(1):139-44. PubMed ID: 19966280
[TBL] [Abstract][Full Text] [Related]
2. Profiling Chromatin Accessibility on Replicated DNA with repli-ATAC-Seq.
Stewart-Morgan KR; Groth A
Methods Mol Biol; 2023; 2611():71-84. PubMed ID: 36807065
[TBL] [Abstract][Full Text] [Related]
3. Genome-Wide Analysis of the Arabidopsis Replication Timing Program.
Concia L; Brooks AM; Wheeler E; Zynda GJ; Wear EE; LeBlanc C; Song J; Lee TJ; Pascuzzi PE; Martienssen RA; Vaughn MW; Thompson WF; Hanley-Bowdoin L
Plant Physiol; 2018 Mar; 176(3):2166-2185. PubMed ID: 29301956
[TBL] [Abstract][Full Text] [Related]
4. DNA methylation is required to maintain both DNA replication timing precision and 3D genome organization integrity.
Du Q; Smith GC; Luu PL; Ferguson JM; Armstrong NJ; Caldon CE; Campbell EM; Nair SS; Zotenko E; Gould CM; Buckley M; Chia KM; Portman N; Lim E; Kaczorowski D; Chan CL; Barton K; Deveson IW; Smith MA; Powell JE; Skvortsova K; Stirzaker C; Achinger-Kawecka J; Clark SJ
Cell Rep; 2021 Sep; 36(12):109722. PubMed ID: 34551299
[TBL] [Abstract][Full Text] [Related]
5. A Protocol for Genome-Wide Analysis of DNA Replication Timing in Intact Root Tips.
Mickelson-Young L; Wear EE; Song J; Zynda GJ; Hanley-Bowdoin L; Thompson WF
Methods Mol Biol; 2022; 2382():29-72. PubMed ID: 34705232
[TBL] [Abstract][Full Text] [Related]
6. High-resolution visualization of H3 variants during replication reveals their controlled recycling.
Clément C; Orsi GA; Gatto A; Boyarchuk E; Forest A; Hajj B; Miné-Hattab J; Garnier M; Gurard-Levin ZA; Quivy JP; Almouzni G
Nat Commun; 2018 Aug; 9(1):3181. PubMed ID: 30093638
[TBL] [Abstract][Full Text] [Related]
7. Transcription Restart Establishes Chromatin Accessibility after DNA Replication.
Stewart-Morgan KR; Reverón-Gómez N; Groth A
Mol Cell; 2019 Jul; 75(2):284-297.e6. PubMed ID: 31126739
[TBL] [Abstract][Full Text] [Related]
8. Mapping Replication Timing in Single Mammalian Cells.
Bartlett DA; Dileep V; Baslan T; Gilbert DM
Curr Protoc; 2022 Jan; 2(1):e334. PubMed ID: 34986273
[TBL] [Abstract][Full Text] [Related]
9. Topologically associating domains are stable units of replication-timing regulation.
Pope BD; Ryba T; Dileep V; Yue F; Wu W; Denas O; Vera DL; Wang Y; Hansen RS; Canfield TK; Thurman RE; Cheng Y; Gülsoy G; Dennis JH; Snyder MP; Stamatoyannopoulos JA; Taylor J; Hardison RC; Kahveci T; Ren B; Gilbert DM
Nature; 2014 Nov; 515(7527):402-5. PubMed ID: 25409831
[TBL] [Abstract][Full Text] [Related]
10. Human genome replication proceeds through four chromatin states.
Julienne H; Zoufir A; Audit B; Arneodo A
PLoS Comput Biol; 2013; 9(10):e1003233. PubMed ID: 24130466
[TBL] [Abstract][Full Text] [Related]
11. Replication Domains: Genome Compartmentalization into Functional Replication Units.
Zhao PA; Rivera-Mulia JC; Gilbert DM
Adv Exp Med Biol; 2017; 1042():229-257. PubMed ID: 29357061
[TBL] [Abstract][Full Text] [Related]
12. High-resolution Repli-Seq defines the temporal choreography of initiation, elongation and termination of replication in mammalian cells.
Zhao PA; Sasaki T; Gilbert DM
Genome Biol; 2020 Mar; 21(1):76. PubMed ID: 32209126
[TBL] [Abstract][Full Text] [Related]
13. Topologically associating domains and their long-range contacts are established during early G1 coincident with the establishment of the replication-timing program.
Dileep V; Ay F; Sima J; Vera DL; Noble WS; Gilbert DM
Genome Res; 2015 Aug; 25(8):1104-13. PubMed ID: 25995270
[TBL] [Abstract][Full Text] [Related]
14. De novo identification of replication-timing domains in the human genome by deep learning.
Liu F; Ren C; Li H; Zhou P; Bo X; Shu W
Bioinformatics; 2016 Mar; 32(5):641-9. PubMed ID: 26545821
[TBL] [Abstract][Full Text] [Related]
15. Chromatin remodeling by WSTF-ISWI at the replication site: opening a window of opportunity for epigenetic inheritance?
Poot RA; Bozhenok L; van den Berg DL; Hawkes N; Varga-Weisz PD
Cell Cycle; 2005 Apr; 4(4):543-6. PubMed ID: 15753658
[TBL] [Abstract][Full Text] [Related]
16. Evolutionarily conserved replication timing profiles predict long-range chromatin interactions and distinguish closely related cell types.
Ryba T; Hiratani I; Lu J; Itoh M; Kulik M; Zhang J; Schulz TC; Robins AJ; Dalton S; Gilbert DM
Genome Res; 2010 Jun; 20(6):761-70. PubMed ID: 20430782
[TBL] [Abstract][Full Text] [Related]
17. Genome-wide dynamics of replication timing revealed by in vitro models of mouse embryogenesis.
Hiratani I; Ryba T; Itoh M; Rathjen J; Kulik M; Papp B; Fussner E; Bazett-Jones DP; Plath K; Dalton S; Rathjen PD; Gilbert DM
Genome Res; 2010 Feb; 20(2):155-69. PubMed ID: 19952138
[TBL] [Abstract][Full Text] [Related]
18. Replication timing and epigenome remodelling are associated with the nature of chromosomal rearrangements in cancer.
Du Q; Bert SA; Armstrong NJ; Caldon CE; Song JZ; Nair SS; Gould CM; Luu PL; Peters T; Khoury A; Qu W; Zotenko E; Stirzaker C; Clark SJ
Nat Commun; 2019 Jan; 10(1):416. PubMed ID: 30679435
[TBL] [Abstract][Full Text] [Related]
19. DNA replication-timing analysis of human chromosome 22 at high resolution and different developmental states.
White EJ; Emanuelsson O; Scalzo D; Royce T; Kosak S; Oakeley EJ; Weissman S; Gerstein M; Groudine M; Snyder M; Schübeler D
Proc Natl Acad Sci U S A; 2004 Dec; 101(51):17771-6. PubMed ID: 15591350
[TBL] [Abstract][Full Text] [Related]
20. Predictable dynamic program of timing of DNA replication in human cells.
Desprat R; Thierry-Mieg D; Lailler N; Lajugie J; Schildkraut C; Thierry-Mieg J; Bouhassira EE
Genome Res; 2009 Dec; 19(12):2288-99. PubMed ID: 19767418
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]