These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

160 related articles for article (PubMed ID: 19969547)

  • 1. Beyond Affymetrix arrays: expanding the set of known hybridization isotherms and observing pre-wash signal intensities.
    Pozhitkov AE; Boube I; Brouwer MH; Noble PA
    Nucleic Acids Res; 2010 Mar; 38(5):e28. PubMed ID: 19969547
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Explaining differences in saturation levels for Affymetrix GeneChip arrays.
    Skvortsov D; Abdueva D; Curtis C; Schaub B; Tavaré S
    Nucleic Acids Res; 2007; 35(12):4154-63. PubMed ID: 17567617
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Base pair interactions and hybridization isotherms of matched and mismatched oligonucleotide probes on microarrays.
    Binder H; Preibisch S; Kirsten T
    Langmuir; 2005 Sep; 21(20):9287-302. PubMed ID: 16171364
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Tests of rRNA hybridization to microarrays suggest that hybridization characteristics of oligonucleotide probes for species discrimination cannot be predicted.
    Pozhitkov A; Noble PA; Domazet-Loso T; Nolte AW; Sonnenberg R; Staehler P; Beier M; Tautz D
    Nucleic Acids Res; 2006 May; 34(9):e66. PubMed ID: 16707658
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Revision of the nonequilibrium thermal dissociation and stringent washing approaches for identification of mixed nucleic acid targets by microarrays.
    Pozhitkov AE; Stedtfeld RD; Hashsham SA; Noble PA
    Nucleic Acids Res; 2007; 35(9):e70. PubMed ID: 17430966
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Washing scaling of GeneChip microarray expression.
    Binder H; Krohn K; Burden CJ
    BMC Bioinformatics; 2010 May; 11():291. PubMed ID: 20509934
    [TBL] [Abstract][Full Text] [Related]  

  • 7. A competitive hybridization model predicts probe signal intensity on high density DNA microarrays.
    Li S; Pozhitkov A; Brouwer M
    Nucleic Acids Res; 2008 Nov; 36(20):6585-91. PubMed ID: 18931378
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Position of the fluorescent label is a crucial factor determining signal intensity in microarray hybridizations.
    Zhang L; Hurek T; Reinhold-Hurek B
    Nucleic Acids Res; 2005 Oct; 33(19):e166. PubMed ID: 16257977
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Relationship between gene expression and observed intensities in DNA microarrays--a modeling study.
    Held GA; Grinstein G; Tu Y
    Nucleic Acids Res; 2006 May; 34(9):e70. PubMed ID: 16723429
    [TBL] [Abstract][Full Text] [Related]  

  • 10. A model of binding on DNA microarrays: understanding the combined effect of probe synthesis failure, cross-hybridization, DNA fragmentation and other experimental details of affymetrix arrays.
    Jakubek YA; Cutler DJ
    BMC Genomics; 2012 Dec; 13():737. PubMed ID: 23270536
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Absolute mRNA concentrations from sequence-specific calibration of oligonucleotide arrays.
    Hekstra D; Taussig AR; Magnasco M; Naef F
    Nucleic Acids Res; 2003 Apr; 31(7):1962-8. PubMed ID: 12655013
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Effect of oligonucleotide probes substituted by deoxyinosines on the specificity of SNP detection on the DNA microarray.
    Qian X; Pu D; Liu B; Xiao P
    Electrophoresis; 2015 Jan; 36(2):263-70. PubMed ID: 25347966
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Improving comparability between microarray probe signals by thermodynamic intensity correction.
    Bruun GM; Wernersson R; Juncker AS; Willenbrock H; Nielsen HB
    Nucleic Acids Res; 2007; 35(7):e48. PubMed ID: 17337437
    [TBL] [Abstract][Full Text] [Related]  

  • 14. On-chip non-equilibrium dissociation curves and dissociation rate constants as methods to assess specificity of oligonucleotide probes.
    Wick LM; Rouillard JM; Whittam TS; Gulari E; Tiedje JM; Hashsham SA
    Nucleic Acids Res; 2006 Feb; 34(3):e26. PubMed ID: 16478712
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Comparisons of substitution, insertion and deletion probes for resequencing and mutational analysis using oligonucleotide microarrays.
    Karaman MW; Groshen S; Lee CC; Pike BL; Hacia JG
    Nucleic Acids Res; 2005 Feb; 33(3):e33. PubMed ID: 15722479
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Combinatorial decoding: an approach for universal DNA array fabrication.
    Epstein JR; Ferguson JA; Lee KH; Walt DR
    J Am Chem Soc; 2003 Nov; 125(45):13753-9. PubMed ID: 14599214
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Analysis of crucial factors resulting in microarray hybridization failure.
    Wei T; Pearson MN; Armstrong K; Blohm D; Liu J
    Mol Biosyst; 2012 Apr; 8(4):1325-38. PubMed ID: 22314967
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Understanding the physics of oligonucleotide microarrays: the Affymetrix spike-in data reanalysed.
    Burden CJ
    Phys Biol; 2008 Mar; 5(1):016004. PubMed ID: 18369276
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Effects of target length on the hybridization efficiency and specificity of rRNA-based oligonucleotide microarrays.
    Liu WT; Guo H; Wu JH
    Appl Environ Microbiol; 2007 Jan; 73(1):73-82. PubMed ID: 17071797
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Mutation detection by stacking hybridization on genosensor arrays.
    Maldonado-Rodriguez R; Espinosa-Lara M; Loyola-Abitia P; Beattie WG; Beattie KL
    Mol Biotechnol; 1999 Feb; 11(1):13-25. PubMed ID: 10367279
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 8.