761 related articles for article (PubMed ID: 20033048)
1. A phylogeny-driven genomic encyclopaedia of Bacteria and Archaea.
Wu D; Hugenholtz P; Mavromatis K; Pukall R; Dalin E; Ivanova NN; Kunin V; Goodwin L; Wu M; Tindall BJ; Hooper SD; Pati A; Lykidis A; Spring S; Anderson IJ; D'haeseleer P; Zemla A; Singer M; Lapidus A; Nolan M; Copeland A; Han C; Chen F; Cheng JF; Lucas S; Kerfeld C; Lang E; Gronow S; Chain P; Bruce D; Rubin EM; Kyrpides NC; Klenk HP; Eisen JA
Nature; 2009 Dec; 462(7276):1056-60. PubMed ID: 20033048
[TBL] [Abstract][Full Text] [Related]
2. Distribution of nitrogen fixation and nitrogenase-like sequences amongst microbial genomes.
Dos Santos PC; Fang Z; Mason SW; Setubal JC; Dixon R
BMC Genomics; 2012 May; 13():162. PubMed ID: 22554235
[TBL] [Abstract][Full Text] [Related]
3. Genomic encyclopedia of bacteria and archaea: sequencing a myriad of type strains.
Kyrpides NC; Hugenholtz P; Eisen JA; Woyke T; Göker M; Parker CT; Amann R; Beck BJ; Chain PS; Chun J; Colwell RR; Danchin A; Dawyndt P; Dedeurwaerdere T; DeLong EF; Detter JC; De Vos P; Donohue TJ; Dong XZ; Ehrlich DS; Fraser C; Gibbs R; Gilbert J; Gilna P; Glöckner FO; Jansson JK; Keasling JD; Knight R; Labeda D; Lapidus A; Lee JS; Li WJ; Ma J; Markowitz V; Moore ER; Morrison M; Meyer F; Nelson KE; Ohkuma M; Ouzounis CA; Pace N; Parkhill J; Qin N; Rossello-Mora R; Sikorski J; Smith D; Sogin M; Stevens R; Stingl U; Suzuki K; Taylor D; Tiedje JM; Tindall B; Wagner M; Weinstock G; Weissenbach J; White O; Wang J; Zhang L; Zhou YG; Field D; Whitman WB; Garrity GM; Klenk HP
PLoS Biol; 2014 Aug; 12(8):e1001920. PubMed ID: 25093819
[TBL] [Abstract][Full Text] [Related]
4. En route to a genome-based classification of Archaea and Bacteria?
Klenk HP; Göker M
Syst Appl Microbiol; 2010 Jun; 33(4):175-82. PubMed ID: 20409658
[TBL] [Abstract][Full Text] [Related]
5. Insights into the phylogeny and coding potential of microbial dark matter.
Rinke C; Schwientek P; Sczyrba A; Ivanova NN; Anderson IJ; Cheng JF; Darling A; Malfatti S; Swan BK; Gies EA; Dodsworth JA; Hedlund BP; Tsiamis G; Sievert SM; Liu WT; Eisen JA; Hallam SJ; Kyrpides NC; Stepanauskas R; Rubin EM; Hugenholtz P; Woyke T
Nature; 2013 Jul; 499(7459):431-7. PubMed ID: 23851394
[TBL] [Abstract][Full Text] [Related]
6. A complete domain-to-species taxonomy for Bacteria and Archaea.
Parks DH; Chuvochina M; Chaumeil PA; Rinke C; Mussig AJ; Hugenholtz P
Nat Biotechnol; 2020 Sep; 38(9):1079-1086. PubMed ID: 32341564
[TBL] [Abstract][Full Text] [Related]
7. Towards a systematic understanding of differences between archaeal and bacterial diversity.
Spang A; Offre P
Environ Microbiol Rep; 2019 Feb; 11(1):9-12. PubMed ID: 30394664
[TBL] [Abstract][Full Text] [Related]
8. Adding genomic 'foliage' to the tree of life.
Walker A
Nat Rev Microbiol; 2014 Feb; 12(2):78. PubMed ID: 24429416
[No Abstract] [Full Text] [Related]
9. Phylogenomics of 10,575 genomes reveals evolutionary proximity between domains Bacteria and Archaea.
Zhu Q; Mai U; Pfeiffer W; Janssen S; Asnicar F; Sanders JG; Belda-Ferre P; Al-Ghalith GA; Kopylova E; McDonald D; Kosciolek T; Yin JB; Huang S; Salam N; Jiao JY; Wu Z; Xu ZZ; Cantrell K; Yang Y; Sayyari E; Rabiee M; Morton JT; Podell S; Knights D; Li WJ; Huttenhower C; Segata N; Smarr L; Mirarab S; Knight R
Nat Commun; 2019 Dec; 10(1):5477. PubMed ID: 31792218
[TBL] [Abstract][Full Text] [Related]
10. AnnoTree: visualization and exploration of a functionally annotated microbial tree of life.
Mendler K; Chen H; Parks DH; Lobb B; Hug LA; Doxey AC
Nucleic Acids Res; 2019 May; 47(9):4442-4448. PubMed ID: 31081040
[TBL] [Abstract][Full Text] [Related]
11. Recovery of nearly 8,000 metagenome-assembled genomes substantially expands the tree of life.
Parks DH; Rinke C; Chuvochina M; Chaumeil PA; Woodcroft BJ; Evans PN; Hugenholtz P; Tyson GW
Nat Microbiol; 2017 Nov; 2(11):1533-1542. PubMed ID: 28894102
[TBL] [Abstract][Full Text] [Related]
12. Inferring Phylogenomic Relationship of Microbes Using Scalable Alignment-Free Methods.
Bernard G; Stephens TG; González-Pech RA; Chan CX
Methods Mol Biol; 2021; 2242():69-76. PubMed ID: 33961218
[TBL] [Abstract][Full Text] [Related]
13. CVTree3 Web Server for Whole-genome-based and Alignment-free Prokaryotic Phylogeny and Taxonomy.
Zuo G; Hao B
Genomics Proteomics Bioinformatics; 2015 Oct; 13(5):321-31. PubMed ID: 26563468
[TBL] [Abstract][Full Text] [Related]
14. MBGD: microbial genome database for comparative analysis.
Uchiyama I
Nucleic Acids Res; 2003 Jan; 31(1):58-62. PubMed ID: 12519947
[TBL] [Abstract][Full Text] [Related]
15. 1,003 reference genomes of bacterial and archaeal isolates expand coverage of the tree of life.
Mukherjee S; Seshadri R; Varghese NJ; Eloe-Fadrosh EA; Meier-Kolthoff JP; Göker M; Coates RC; Hadjithomas M; Pavlopoulos GA; Paez-Espino D; Yoshikuni Y; Visel A; Whitman WB; Garrity GM; Eisen JA; Hugenholtz P; Pati A; Ivanova NN; Woyke T; Klenk HP; Kyrpides NC
Nat Biotechnol; 2017 Jul; 35(7):676-683. PubMed ID: 28604660
[TBL] [Abstract][Full Text] [Related]
16. Illuminating microbial diversity.
Forster SC
Nat Rev Microbiol; 2017 Oct; 15(10):578. PubMed ID: 28852214
[No Abstract] [Full Text] [Related]
17. Comparative genomics analysis of completely sequenced microbial genomes reveals the ubiquity of N-linked glycosylation in prokaryotes.
Kumar M; Balaji PV
Mol Biosyst; 2011 May; 7(5):1629-45. PubMed ID: 21387023
[TBL] [Abstract][Full Text] [Related]
18. [A system for comparative analysis of microbial genomes].
Uchiyama I
Nihon Rinsho; 2003 Mar; 61 Suppl 3():441-8. PubMed ID: 12718007
[No Abstract] [Full Text] [Related]
19. Telling the whole story in a 10,000-genome world.
Beiko RG
Biol Direct; 2011 Jun; 6():34. PubMed ID: 21714939
[TBL] [Abstract][Full Text] [Related]
20. Archaeal origin of tubulin.
Yutin N; Koonin EV
Biol Direct; 2012 Mar; 7():10. PubMed ID: 22458654
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
