These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

154 related articles for article (PubMed ID: 20046543)

  • 1. Formaldehyde-assisted isolation of regulatory elements.
    Nagy PL; Price DH
    Wiley Interdiscip Rev Syst Biol Med; 2009; 1(3):400-406. PubMed ID: 20046543
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Isolation of active regulatory elements from eukaryotic chromatin using FAIRE (Formaldehyde Assisted Isolation of Regulatory Elements).
    Giresi PG; Lieb JD
    Methods; 2009 Jul; 48(3):233-9. PubMed ID: 19303047
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Global Mapping of Open Chromatin Regulatory Elements by Formaldehyde-Assisted Isolation of Regulatory Elements Followed by Sequencing (FAIRE-seq).
    Bianco S; Rodrigue S; Murphy BD; Gévry N
    Methods Mol Biol; 2015; 1334():261-72. PubMed ID: 26404156
    [TBL] [Abstract][Full Text] [Related]  

  • 4. FAIRE (Formaldehyde-Assisted Isolation of Regulatory Elements) isolates active regulatory elements from human chromatin.
    Giresi PG; Kim J; McDaniell RM; Iyer VR; Lieb JD
    Genome Res; 2007 Jun; 17(6):877-85. PubMed ID: 17179217
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Formaldehyde-assisted Isolation of Regulatory Elements to Measure Chromatin Accessibility in Mammalian Cells.
    Rodríguez-Gil A; Riedlinger T; Ritter O; Saul VV; Schmitz ML
    J Vis Exp; 2018 Apr; (134):. PubMed ID: 29658938
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Using formaldehyde-assisted isolation of regulatory elements (FAIRE) to isolate active regulatory DNA.
    Simon JM; Giresi PG; Davis IJ; Lieb JD
    Nat Protoc; 2012 Jan; 7(2):256-67. PubMed ID: 22262007
    [TBL] [Abstract][Full Text] [Related]  

  • 7. A detailed protocol for formaldehyde-assisted isolation of regulatory elements (FAIRE).
    Simon JM; Giresi PG; Davis IJ; Lieb JD
    Curr Protoc Mol Biol; 2013; Chapter 21():Unit21.26. PubMed ID: 23547014
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Open chromatin defined by DNaseI and FAIRE identifies regulatory elements that shape cell-type identity.
    Song L; Zhang Z; Grasfeder LL; Boyle AP; Giresi PG; Lee BK; Sheffield NC; Gräf S; Huss M; Keefe D; Liu Z; London D; McDaniell RM; Shibata Y; Showers KA; Simon JM; Vales T; Wang T; Winter D; Zhang Z; Clarke ND; Birney E; Iyer VR; Crawford GE; Lieb JD; Furey TS
    Genome Res; 2011 Oct; 21(10):1757-67. PubMed ID: 21750106
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Formaldehyde-Assisted Isolation of Regulatory Elements (FAIRE) analysis uncovers broad changes in chromatin structure resulting from hexavalent chromium exposure.
    Ovesen JL; Fan Y; Zhang X; Chen J; Medvedovic M; Xia Y; Puga A
    PLoS One; 2014; 9(5):e97849. PubMed ID: 24837440
    [TBL] [Abstract][Full Text] [Related]  

  • 10. A step-by-step protocol for formaldehyde-assisted isolation of regulatory elements from Arabidopsis thaliana.
    Omidbakhshfard MA; Winck FV; Arvidsson S; Riaño-Pachón DM; Mueller-Roeber B
    J Integr Plant Biol; 2014 Jun; 56(6):527-38. PubMed ID: 24373132
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Formaldehyde-assisted isolation of regulatory DNA elements from Arabidopsis leaves.
    Baum S; Reimer-Michalski EM; Jaskiewicz MR; Conrath U
    Nat Protoc; 2020 Mar; 15(3):713-733. PubMed ID: 32042178
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Mapping open chromatin with formaldehyde-assisted isolation of regulatory elements.
    Nammo T; Rodríguez-Seguí SA; Ferrer J
    Methods Mol Biol; 2011; 791():287-96. PubMed ID: 21913087
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Using Formaldehyde-Assisted Isolation of Regulatory Elements (FAIRE) to Identify Functional Regulatory DNA in Insect Genomes.
    McKay DJ
    Methods Mol Biol; 2019; 1858():89-97. PubMed ID: 30414113
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Defining Regulatory Elements in the Human Genome Using Nucleosome Occupancy and Methylome Sequencing (NOMe-Seq).
    Rhie SK; Schreiner S; Farnham PJ
    Methods Mol Biol; 2018; 1766():209-229. PubMed ID: 29605855
    [TBL] [Abstract][Full Text] [Related]  

  • 15. High-throughput cis-regulatory element discovery in the vector mosquito Aedes aegypti.
    Behura SK; Sarro J; Li P; Mysore K; Severson DW; Emrich SJ; Duman-Scheel M
    BMC Genomics; 2016 May; 17():341. PubMed ID: 27161480
    [TBL] [Abstract][Full Text] [Related]  

  • 16. A map of open chromatin in human pancreatic islets.
    Gaulton KJ; Nammo T; Pasquali L; Simon JM; Giresi PG; Fogarty MP; Panhuis TM; Mieczkowski P; Secchi A; Bosco D; Berney T; Montanya E; Mohlke KL; Lieb JD; Ferrer J
    Nat Genet; 2010 Mar; 42(3):255-9. PubMed ID: 20118932
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Mapping Genome-wide Accessible Chromatin in Primary Human T Lymphocytes by ATAC-Seq.
    Grbesa I; Tannenbaum M; Sarusi-Portuguez A; Schwartz M; Hakim O
    J Vis Exp; 2017 Nov; (129):. PubMed ID: 29155775
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Analysis of chromatin dynamics during glucocorticoid receptor activation.
    Burd CJ; Ward JM; Crusselle-Davis VJ; Kissling GE; Phadke D; Shah RR; Archer TK
    Mol Cell Biol; 2012 May; 32(10):1805-17. PubMed ID: 22451486
    [TBL] [Abstract][Full Text] [Related]  

  • 19. An optimized FAIRE procedure for low cell numbers in yeast.
    Segorbe D; Wilkinson D; Mizeranschi A; Hughes T; Aaløkken R; Váchová L; Palková Z; Gilfillan GD
    Yeast; 2018 Aug; 35(8):507-512. PubMed ID: 29577419
    [TBL] [Abstract][Full Text] [Related]  

  • 20. A novel method to predict regulatory regions based on histone mark landscapes in macrophages.
    Nagy G; Dániel B; Jónás D; Nagy L; Barta E
    Immunobiology; 2013 Nov; 218(11):1416-27. PubMed ID: 23973299
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 8.