BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

277 related articles for article (PubMed ID: 20052271)

  • 21. Striped sheets and protein contact prediction.
    MacCallum RM
    Bioinformatics; 2004 Aug; 20 Suppl 1():i224-31. PubMed ID: 15262803
    [TBL] [Abstract][Full Text] [Related]  

  • 22. Improving homology models for protein-ligand binding sites.
    Kauffman C; Rangwala H; Karypis G
    Comput Syst Bioinformatics Conf; 2008; 7():211-22. PubMed ID: 19642282
    [TBL] [Abstract][Full Text] [Related]  

  • 23. Learning scoring schemes for sequence alignment from partial examples.
    Kim E; Kececioglu J
    IEEE/ACM Trans Comput Biol Bioinform; 2008; 5(4):546-56. PubMed ID: 18989042
    [TBL] [Abstract][Full Text] [Related]  

  • 24. Protein sectors: statistical coupling analysis versus conservation.
    Teşileanu T; Colwell LJ; Leibler S
    PLoS Comput Biol; 2015 Feb; 11(2):e1004091. PubMed ID: 25723535
    [TBL] [Abstract][Full Text] [Related]  

  • 25. Prediction of contact maps by GIOHMMs and recurrent neural networks using lateral propagation from all four cardinal corners.
    Pollastri G; Baldi P
    Bioinformatics; 2002; 18 Suppl 1():S62-70. PubMed ID: 12169532
    [TBL] [Abstract][Full Text] [Related]  

  • 26. The contrasting properties of conservation and correlated phylogeny in protein functional residue prediction.
    Manning JR; Jefferson ER; Barton GJ
    BMC Bioinformatics; 2008 Jan; 9():51. PubMed ID: 18221517
    [TBL] [Abstract][Full Text] [Related]  

  • 27. Multiple sequence alignment by conformational space annealing.
    Joo K; Lee J; Kim I; Lee SJ; Lee J
    Biophys J; 2008 Nov; 95(10):4813-9. PubMed ID: 18689453
    [TBL] [Abstract][Full Text] [Related]  

  • 28. Fold recognition by predicted alignment accuracy.
    Xu J
    IEEE/ACM Trans Comput Biol Bioinform; 2005; 2(2):157-65. PubMed ID: 17044180
    [TBL] [Abstract][Full Text] [Related]  

  • 29. Improving accuracy of protein contact prediction using balanced network deconvolution.
    Sun HP; Huang Y; Wang XF; Zhang Y; Shen HB
    Proteins; 2015 Mar; 83(3):485-96. PubMed ID: 25524593
    [TBL] [Abstract][Full Text] [Related]  

  • 30. Predicting functionally important residues from sequence conservation.
    Capra JA; Singh M
    Bioinformatics; 2007 Aug; 23(15):1875-82. PubMed ID: 17519246
    [TBL] [Abstract][Full Text] [Related]  

  • 31. Progressive multiple alignment using sequence triplet optimizations and three-residue exchange costs.
    Konagurthu AS; Whisstock J; Stuckey PJ
    J Bioinform Comput Biol; 2004 Dec; 2(4):719-45. PubMed ID: 15617163
    [TBL] [Abstract][Full Text] [Related]  

  • 32. VISTAL--a new 2D visualization tool of protein 3D structural alignments.
    Kolodny R; Honig B
    Bioinformatics; 2006 Sep; 22(17):2166-7. PubMed ID: 16837525
    [TBL] [Abstract][Full Text] [Related]  

  • 33. PROMALS: towards accurate multiple sequence alignments of distantly related proteins.
    Pei J; Grishin NV
    Bioinformatics; 2007 Apr; 23(7):802-8. PubMed ID: 17267437
    [TBL] [Abstract][Full Text] [Related]  

  • 34. Power law tails in phylogenetic systems.
    Qin C; Colwell LJ
    Proc Natl Acad Sci U S A; 2018 Jan; 115(4):690-695. PubMed ID: 29311320
    [TBL] [Abstract][Full Text] [Related]  

  • 35. Improving protein-protein interaction prediction using evolutionary information from low-quality MSAs.
    Várnai C; Burkoff NS; Wild DL
    PLoS One; 2017; 12(2):e0169356. PubMed ID: 28166227
    [TBL] [Abstract][Full Text] [Related]  

  • 36. Correlated mutations via regularized multinomial regression.
    Sreekumar J; ter Braak CJ; van Ham RC; van Dijk AD
    BMC Bioinformatics; 2011 Nov; 12():444. PubMed ID: 22082126
    [TBL] [Abstract][Full Text] [Related]  

  • 37. CAB-Align: A Flexible Protein Structure Alignment Method Based on the Residue-Residue Contact Area.
    Terashi G; Takeda-Shitaka M
    PLoS One; 2015; 10(10):e0141440. PubMed ID: 26502070
    [TBL] [Abstract][Full Text] [Related]  

  • 38. Stochastic pairwise alignments.
    Mückstein U; Hofacker IL; Stadler PF
    Bioinformatics; 2002; 18 Suppl 2():S153-60. PubMed ID: 12385998
    [TBL] [Abstract][Full Text] [Related]  

  • 39. Adaptive Smith-Waterman residue match seeding for protein structural alignment.
    Topham CM; Rouquier M; Tarrat N; André I
    Proteins; 2013 Oct; 81(10):1823-39. PubMed ID: 23720362
    [TBL] [Abstract][Full Text] [Related]  

  • 40. Partial order optimum likelihood (POOL): maximum likelihood prediction of protein active site residues using 3D Structure and sequence properties.
    Tong W; Wei Y; Murga LF; Ondrechen MJ; Williams RJ
    PLoS Comput Biol; 2009 Jan; 5(1):e1000266. PubMed ID: 19148270
    [TBL] [Abstract][Full Text] [Related]  

    [Previous]   [Next]    [New Search]
    of 14.