BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

204 related articles for article (PubMed ID: 20074370)

  • 1. Enhanced CellClassifier: a multi-class classification tool for microscopy images.
    Misselwitz B; Strittmatter G; Periaswamy B; Schlumberger MC; Rout S; Horvath P; Kozak K; Hardt WD
    BMC Bioinformatics; 2010 Jan; 11():30. PubMed ID: 20074370
    [TBL] [Abstract][Full Text] [Related]  

  • 2. CellProfiler Analyst 3.0: accessible data exploration and machine learning for image analysis.
    Stirling DR; Carpenter AE; Cimini BA
    Bioinformatics; 2021 Nov; 37(21):3992-3994. PubMed ID: 34478488
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Advanced Cell Classifier: User-Friendly Machine-Learning-Based Software for Discovering Phenotypes in High-Content Imaging Data.
    Piccinini F; Balassa T; Szkalisity A; Molnar C; Paavolainen L; Kujala K; Buzas K; Sarazova M; Pietiainen V; Kutay U; Smith K; Horvath P
    Cell Syst; 2017 Jun; 4(6):651-655.e5. PubMed ID: 28647475
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Multi-template matching: a versatile tool for object-localization in microscopy images.
    Thomas LSV; Gehrig J
    BMC Bioinformatics; 2020 Feb; 21(1):44. PubMed ID: 32024462
    [TBL] [Abstract][Full Text] [Related]  

  • 5. CellProfiler Tracer: exploring and validating high-throughput, time-lapse microscopy image data.
    Bray MA; Carpenter AE
    BMC Bioinformatics; 2015 Nov; 16():368. PubMed ID: 26537300
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Automated Classification of Cellular Phenotypes Using Machine Learning in Cellprofiler and CellProfiler Analyst.
    Kornhuber M; Dunst S
    Methods Mol Biol; 2022; 2488():207-226. PubMed ID: 35347691
    [TBL] [Abstract][Full Text] [Related]  

  • 7. DetecTiff: a novel image analysis routine for high-content screening microscopy.
    Gilbert DF; Meinhof T; Pepperkok R; Runz H
    J Biomol Screen; 2009 Sep; 14(8):944-55. PubMed ID: 19641223
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Quality Control for High-Throughput Imaging Experiments Using Machine Learning in Cellprofiler.
    Bray MA; Carpenter AE
    Methods Mol Biol; 2018; 1683():89-112. PubMed ID: 29082489
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Fast processing of microscopic images using object-based extended depth of field.
    Intarapanich A; Kaewkamnerd S; Pannarut M; Shaw PJ; Tongsima S
    BMC Bioinformatics; 2016 Dec; 17(Suppl 19):516. PubMed ID: 28155648
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Bright field microscopy as an alternative to whole cell fluorescence in automated analysis of macrophage images.
    Selinummi J; Ruusuvuori P; Podolsky I; Ozinsky A; Gold E; Yli-Harja O; Aderem A; Shmulevich I
    PLoS One; 2009 Oct; 4(10):e7497. PubMed ID: 19847301
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Assessing microscope image focus quality with deep learning.
    Yang SJ; Berndl M; Michael Ando D; Barch M; Narayanaswamy A; Christiansen E; Hoyer S; Roat C; Hung J; Rueden CT; Shankar A; Finkbeiner S; Nelson P
    BMC Bioinformatics; 2018 Mar; 19(1):77. PubMed ID: 29540156
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Workflow and metrics for image quality control in large-scale high-content screens.
    Bray MA; Fraser AN; Hasaka TP; Carpenter AE
    J Biomol Screen; 2012 Feb; 17(2):266-74. PubMed ID: 21956170
    [TBL] [Abstract][Full Text] [Related]  

  • 13. CellClassifier: supervised learning of cellular phenotypes.
    Rämö P; Sacher R; Snijder B; Begemann B; Pelkmans L
    Bioinformatics; 2009 Nov; 25(22):3028-30. PubMed ID: 19729371
    [TBL] [Abstract][Full Text] [Related]  

  • 14. BactImAS: a platform for processing and analysis of bacterial time-lapse microscopy movies.
    Mekterović I; Mekterović D; Maglica Z
    BMC Bioinformatics; 2014 Jul; 15(1):251. PubMed ID: 25059528
    [TBL] [Abstract][Full Text] [Related]  

  • 15. CP-CHARM: segmentation-free image classification made accessible.
    Uhlmann V; Singh S; Carpenter AE
    BMC Bioinformatics; 2016 Jan; 17():51. PubMed ID: 26817459
    [TBL] [Abstract][Full Text] [Related]  

  • 16. CellProfiler Analyst: data exploration and analysis software for complex image-based screens.
    Jones TR; Kang IH; Wheeler DB; Lindquist RA; Papallo A; Sabatini DM; Golland P; Carpenter AE
    BMC Bioinformatics; 2008 Nov; 9():482. PubMed ID: 19014601
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Automatic digital ECG signal extraction and normal QRS recognition from real scene ECG images.
    Wang S; Zhang S; Li Z; Huang L; Wei Z
    Comput Methods Programs Biomed; 2020 Apr; 187():105254. PubMed ID: 31830698
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Learning a cost function for microscope image segmentation.
    Nilufar S; Perkins TJ
    Annu Int Conf IEEE Eng Med Biol Soc; 2014; 2014():5506-9. PubMed ID: 25571241
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Using CellProfiler for Automatic Identification and Measurement of Biological Objects in Images.
    Bray MA; Vokes MS; Carpenter AE
    Curr Protoc Mol Biol; 2015 Jan; 109():14.17.1-14.17.13. PubMed ID: 25559103
    [TBL] [Abstract][Full Text] [Related]  

  • 20. High-content screening: imaging, analysis, and implementation.
    McGee J
    J Biomol Screen; 2012 Feb; 17(2):275-7. PubMed ID: 22282877
    [No Abstract]   [Full Text] [Related]  

    [Next]    [New Search]
    of 11.