These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

144 related articles for article (PubMed ID: 20089514)

  • 1. iDBPs: a web server for the identification of DNA binding proteins.
    Nimrod G; Schushan M; Szilágyi A; Leslie C; Ben-Tal N
    Bioinformatics; 2010 Mar; 26(5):692-3. PubMed ID: 20089514
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Identification of DNA-binding proteins using structural, electrostatic and evolutionary features.
    Nimrod G; Szilágyi A; Leslie C; Ben-Tal N
    J Mol Biol; 2009 Apr; 387(4):1040-53. PubMed ID: 19233205
    [TBL] [Abstract][Full Text] [Related]  

  • 3. DP-Bind: a web server for sequence-based prediction of DNA-binding residues in DNA-binding proteins.
    Hwang S; Gou Z; Kuznetsov IB
    Bioinformatics; 2007 Mar; 23(5):634-6. PubMed ID: 17237068
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Identification of DNA-binding proteins using multi-features fusion and binary firefly optimization algorithm.
    Zhang J; Gao B; Chai H; Ma Z; Yang G
    BMC Bioinformatics; 2016 Aug; 17(1):323. PubMed ID: 27565741
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Sequence-based prediction of DNA-binding residues in proteins with conservation and correlation information.
    Ma X; Guo J; Liu HD; Xie JM; Sun X
    IEEE/ACM Trans Comput Biol Bioinform; 2012; 9(6):1766-75. PubMed ID: 22868682
    [TBL] [Abstract][Full Text] [Related]  

  • 6. DR_bind: a web server for predicting DNA-binding residues from the protein structure based on electrostatics, evolution and geometry.
    Chen YC; Wright JD; Lim C
    Nucleic Acids Res; 2012 Jul; 40(Web Server issue):W249-56. PubMed ID: 22661576
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Prediction of DNA-binding residues from protein sequence information using random forests.
    Wang L; Yang MQ; Yang JY
    BMC Genomics; 2009 Jul; 10 Suppl 1(Suppl 1):S1. PubMed ID: 19594868
    [TBL] [Abstract][Full Text] [Related]  

  • 8. BindUP: a web server for non-homology-based prediction of DNA and RNA binding proteins.
    Paz I; Kligun E; Bengad B; Mandel-Gutfreund Y
    Nucleic Acids Res; 2016 Jul; 44(W1):W568-74. PubMed ID: 27198220
    [TBL] [Abstract][Full Text] [Related]  

  • 9. ProFunc: a server for predicting protein function from 3D structure.
    Laskowski RA; Watson JD; Thornton JM
    Nucleic Acids Res; 2005 Jul; 33(Web Server issue):W89-93. PubMed ID: 15980588
    [TBL] [Abstract][Full Text] [Related]  

  • 10. 3D-partner: a web server to infer interacting partners and binding models.
    Chen YC; Lo YS; Hsu WC; Yang JM
    Nucleic Acids Res; 2007 Jul; 35(Web Server issue):W561-7. PubMed ID: 17517763
    [TBL] [Abstract][Full Text] [Related]  

  • 11. The ConSurf-HSSP database: the mapping of evolutionary conservation among homologs onto PDB structures.
    Glaser F; Rosenberg Y; Kessel A; Pupko T; Ben-Tal N
    Proteins; 2005 Feb; 58(3):610-7. PubMed ID: 15614759
    [TBL] [Abstract][Full Text] [Related]  

  • 12. InterProSurf: a web server for predicting interacting sites on protein surfaces.
    Negi SS; Schein CH; Oezguen N; Power TD; Braun W
    Bioinformatics; 2007 Dec; 23(24):3397-9. PubMed ID: 17933856
    [TBL] [Abstract][Full Text] [Related]  

  • 13. NAPS: a residue-level nucleic acid-binding prediction server.
    Carson MB; Langlois R; Lu H
    Nucleic Acids Res; 2010 Jul; 38(Web Server issue):W431-5. PubMed ID: 20478832
    [TBL] [Abstract][Full Text] [Related]  

  • 14. RNABindR: a server for analyzing and predicting RNA-binding sites in proteins.
    Terribilini M; Sander JD; Lee JH; Zaback P; Jernigan RL; Honavar V; Dobbs D
    Nucleic Acids Res; 2007 Jul; 35(Web Server issue):W578-84. PubMed ID: 17483510
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Detection of functionally important regions in "hypothetical proteins" of known structure.
    Nimrod G; Schushan M; Steinberg DM; Ben-Tal N
    Structure; 2008 Dec; 16(12):1755-63. PubMed ID: 19081051
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Dali server: conservation mapping in 3D.
    Holm L; Rosenström P
    Nucleic Acids Res; 2010 Jul; 38(Web Server issue):W545-9. PubMed ID: 20457744
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Predicting functional sites with an automated algorithm suitable for heterogeneous datasets.
    La D; Livesay DR
    BMC Bioinformatics; 2005 May; 6():116. PubMed ID: 15890082
    [TBL] [Abstract][Full Text] [Related]  

  • 18. PSSM-based prediction of DNA binding sites in proteins.
    Ahmad S; Sarai A
    BMC Bioinformatics; 2005 Feb; 6():33. PubMed ID: 15720719
    [TBL] [Abstract][Full Text] [Related]  

  • 19. ANCHOR: web server for predicting protein binding regions in disordered proteins.
    Dosztányi Z; Mészáros B; Simon I
    Bioinformatics; 2009 Oct; 25(20):2745-6. PubMed ID: 19717576
    [TBL] [Abstract][Full Text] [Related]  

  • 20. DNABP: Identification of DNA-Binding Proteins Based on Feature Selection Using a Random Forest and Predicting Binding Residues.
    Ma X; Guo J; Sun X
    PLoS One; 2016; 11(12):e0167345. PubMed ID: 27907159
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 8.