347 related articles for article (PubMed ID: 20103589)
1. Impact of replication timing on non-CpG and CpG substitution rates in mammalian genomes.
Chen CL; Rappailles A; Duquenne L; Huvet M; Guilbaud G; Farinelli L; Audit B; d'Aubenton-Carafa Y; Arneodo A; Hyrien O; Thermes C
Genome Res; 2010 Apr; 20(4):447-57. PubMed ID: 20103589
[TBL] [Abstract][Full Text] [Related]
2. Neutral substitutions occur at a faster rate in exons than in noncoding DNA in primate genomes.
Subramanian S; Kumar S
Genome Res; 2003 May; 13(5):838-44. PubMed ID: 12727904
[TBL] [Abstract][Full Text] [Related]
3. Mutations of different molecular origins exhibit contrasting patterns of regional substitution rate variation.
Elango N; Kim SH; Vigoda E; Yi SV
PLoS Comput Biol; 2008 Feb; 4(2):e1000015. PubMed ID: 18463707
[TBL] [Abstract][Full Text] [Related]
4. The impact of recombination on nucleotide substitutions in the human genome.
Duret L; Arndt PF
PLoS Genet; 2008 May; 4(5):e1000071. PubMed ID: 18464896
[TBL] [Abstract][Full Text] [Related]
5. Strong and weak male mutation bias at different sites in the primate genomes: insights from the human-chimpanzee comparison.
Taylor J; Tyekucheva S; Zody M; Chiaromonte F; Makova KD
Mol Biol Evol; 2006 Mar; 23(3):565-73. PubMed ID: 16280537
[TBL] [Abstract][Full Text] [Related]
6. Evaluation of the effect of CpG hypermutability on human codon substitution.
Misawa K; Kikuno RF
Gene; 2009 Feb; 431(1-2):18-22. PubMed ID: 19059467
[TBL] [Abstract][Full Text] [Related]
7. Increased substitution rates surrounding low-complexity regions within primate proteins.
Lenz C; Haerty W; Golding GB
Genome Biol Evol; 2014 Mar; 6(3):655-65. PubMed ID: 24572016
[TBL] [Abstract][Full Text] [Related]
8. Effect of the assignment of ancestral CpG state on the estimation of nucleotide substitution rates in mammals.
Gaffney DJ; Keightley PD
BMC Evol Biol; 2008 Sep; 8():265. PubMed ID: 18826599
[TBL] [Abstract][Full Text] [Related]
9. Substitution rate variation at human CpG sites correlates with non-CpG divergence, methylation level and GC content.
Mugal CF; Ellegren H
Genome Biol; 2011 Jun; 12(6):R58. PubMed ID: 21696599
[TBL] [Abstract][Full Text] [Related]
10. Preservation of methylated CpG dinucleotides in human CpG islands.
Panchin AY; Makeev VJ; Medvedeva YA
Biol Direct; 2016 Mar; 11(1):11. PubMed ID: 27005429
[TBL] [Abstract][Full Text] [Related]
11. Linking the DNA strand asymmetry to the spatio-temporal replication program. I. About the role of the replication fork polarity in genome evolution.
Baker A; Julienne H; Chen CL; Audit B; d'Aubenton-Carafa Y; Thermes C; Arneodo A
Eur Phys J E Soft Matter; 2012 Sep; 35(9):92. PubMed ID: 23001787
[TBL] [Abstract][Full Text] [Related]
12. Directionality of point mutation and 5-methylcytosine deamination rates in the chimpanzee genome.
Jiang C; Zhao Z
BMC Genomics; 2006 Dec; 7():316. PubMed ID: 17166280
[TBL] [Abstract][Full Text] [Related]
13. The mutational spectrum of non-CpG DNA varies with CpG content.
Walser JC; Furano AV
Genome Res; 2010 Jul; 20(7):875-82. PubMed ID: 20498119
[TBL] [Abstract][Full Text] [Related]
14. Evolutionary expansion of DNA hypomethylation in the mammalian germline genome.
Qu J; Hodges E; Molaro A; Gagneux P; Dean MD; Hannon GJ; Smith AD
Genome Res; 2018 Feb; 28(2):145-158. PubMed ID: 29259021
[TBL] [Abstract][Full Text] [Related]
15. The genome-wide landscape of C:G > T:A polymorphism at the CpG contexts in the human population.
Youk J; An Y; Park S; Lee JK; Ju YS
BMC Genomics; 2020 Mar; 21(1):270. PubMed ID: 32228436
[TBL] [Abstract][Full Text] [Related]
16. CpG island density and its correlations with genomic features in mammalian genomes.
Han L; Su B; Li WH; Zhao Z
Genome Biol; 2008; 9(5):R79. PubMed ID: 18477403
[TBL] [Abstract][Full Text] [Related]
17. Heterogeneous genomic molecular clocks in primates.
Kim SH; Elango N; Warden C; Vigoda E; Yi SV
PLoS Genet; 2006 Oct; 2(10):e163. PubMed ID: 17029560
[TBL] [Abstract][Full Text] [Related]
18. DNA replication timing and higher-order nuclear organization determine single-nucleotide substitution patterns in cancer genomes.
Liu L; De S; Michor F
Nat Commun; 2013; 4():1502. PubMed ID: 23422670
[TBL] [Abstract][Full Text] [Related]
19. CpG dinucleotides and the mutation rate of non-CpG DNA.
Walser JC; Ponger L; Furano AV
Genome Res; 2008 Sep; 18(9):1403-14. PubMed ID: 18550801
[TBL] [Abstract][Full Text] [Related]
20. New words in human mutagenesis.
Panchin AY; Mitrofanov SI; Alexeevski AV; Spirin SA; Panchin YV
BMC Bioinformatics; 2011 Jun; 12():268. PubMed ID: 21718472
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
