BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

110 related articles for article (PubMed ID: 20118117)

  • 1. A fast and automated solution for accurately resolving protein domain architectures.
    Yeats C; Redfern OC; Orengo C
    Bioinformatics; 2010 Mar; 26(6):745-51. PubMed ID: 20118117
    [TBL] [Abstract][Full Text] [Related]  

  • 2. The CATH Domain Structure Database and related resources Gene3D and DHS provide comprehensive domain family information for genome analysis.
    Pearl F; Todd A; Sillitoe I; Dibley M; Redfern O; Lewis T; Bennett C; Marsden R; Grant A; Lee D; Akpor A; Maibaum M; Harrison A; Dallman T; Reeves G; Diboun I; Addou S; Lise S; Johnston C; Sillero A; Thornton J; Orengo C
    Nucleic Acids Res; 2005 Jan; 33(Database issue):D247-51. PubMed ID: 15608188
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Gene3D: merging structure and function for a Thousand genomes.
    Lees J; Yeats C; Redfern O; Clegg A; Orengo C
    Nucleic Acids Res; 2010 Jan; 38(Database issue):D296-300. PubMed ID: 19906693
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Identification and distribution of protein families in 120 completed genomes using Gene3D.
    Lee D; Grant A; Marsden RL; Orengo C
    Proteins; 2005 May; 59(3):603-15. PubMed ID: 15768405
    [TBL] [Abstract][Full Text] [Related]  

  • 5. A multi-objective optimization approach accurately resolves protein domain architectures.
    Bernardes JS; Vieira FR; Zaverucha G; Carbone A
    Bioinformatics; 2016 Feb; 32(3):345-53. PubMed ID: 26458889
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Gene3D: structural assignments for the biologist and bioinformaticist alike.
    Buchan DW; Rison SC; Bray JE; Lee D; Pearl F; Thornton JM; Orengo CA
    Nucleic Acids Res; 2003 Jan; 31(1):469-73. PubMed ID: 12520054
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Gene3D: a domain-based resource for comparative genomics, functional annotation and protein network analysis.
    Lees J; Yeats C; Perkins J; Sillitoe I; Rentzsch R; Dessailly BH; Orengo C
    Nucleic Acids Res; 2012 Jan; 40(Database issue):D465-71. PubMed ID: 22139938
    [TBL] [Abstract][Full Text] [Related]  

  • 8. AutoSCOP: automated prediction of SCOP classifications using unique pattern-class mappings.
    Gewehr JE; Hintermair V; Zimmer R
    Bioinformatics; 2007 May; 23(10):1203-10. PubMed ID: 17379694
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Gene3D: Multi-domain annotations for protein sequence and comparative genome analysis.
    Lees JG; Lee D; Studer RA; Dawson NL; Sillitoe I; Das S; Yeats C; Dessailly BH; Rentzsch R; Orengo CA
    Nucleic Acids Res; 2014 Jan; 42(Database issue):D240-5. PubMed ID: 24270792
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Gene3D: modelling protein structure, function and evolution.
    Yeats C; Maibaum M; Marsden R; Dibley M; Lee D; Addou S; Orengo CA
    Nucleic Acids Res; 2006 Jan; 34(Database issue):D281-4. PubMed ID: 16381865
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Gene3D: Extensive prediction of globular domains in proteins.
    Lewis TE; Sillitoe I; Dawson N; Lam SD; Clarke T; Lee D; Orengo C; Lees J
    Nucleic Acids Res; 2018 Jan; 46(D1):D435-D439. PubMed ID: 29112716
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Gene3D: comprehensive structural and functional annotation of genomes.
    Yeats C; Lees J; Reid A; Kellam P; Martin N; Liu X; Orengo C
    Nucleic Acids Res; 2008 Jan; 36(Database issue):D414-8. PubMed ID: 18032434
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Gene3D: expanding the utility of domain assignments.
    Lam SD; Dawson NL; Das S; Sillitoe I; Ashford P; Lee D; Lehtinen S; Orengo CA; Lees JG
    Nucleic Acids Res; 2016 Jan; 44(D1):D404-9. PubMed ID: 26578585
    [TBL] [Abstract][Full Text] [Related]  

  • 14. The Gene3D Web Services: a platform for identifying, annotating and comparing structural domains in protein sequences.
    Yeats C; Lees J; Carter P; Sillitoe I; Orengo C
    Nucleic Acids Res; 2011 Jul; 39(Web Server issue):W546-50. PubMed ID: 21646335
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Evolution of function in protein superfamilies, from a structural perspective.
    Todd AE; Orengo CA; Thornton JM
    J Mol Biol; 2001 Apr; 307(4):1113-43. PubMed ID: 11286560
    [TBL] [Abstract][Full Text] [Related]  

  • 16. SCOPEC: a database of protein catalytic domains.
    George RA; Spriggs RV; Thornton JM; Al-Lazikani B; Swindells MB
    Bioinformatics; 2004 Aug; 20 Suppl 1():i130-6. PubMed ID: 15262791
    [TBL] [Abstract][Full Text] [Related]  

  • 17. SMART 4.0: towards genomic data integration.
    Letunic I; Copley RR; Schmidt S; Ciccarelli FD; Doerks T; Schultz J; Ponting CP; Bork P
    Nucleic Acids Res; 2004 Jan; 32(Database issue):D142-4. PubMed ID: 14681379
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Accurate domain identification with structure-anchored hidden Markov models, saHMMs.
    Tångrot JE; Kågström B; Sauer UH
    Proteins; 2009 Aug; 76(2):343-52. PubMed ID: 19173309
    [TBL] [Abstract][Full Text] [Related]  

  • 19. AIDA: ab initio domain assembly for automated multi-domain protein structure prediction and domain-domain interaction prediction.
    Xu D; Jaroszewski L; Li Z; Godzik A
    Bioinformatics; 2015 Jul; 31(13):2098-105. PubMed ID: 25701568
    [TBL] [Abstract][Full Text] [Related]  

  • 20. A comprehensive and non-redundant database of protein domain movements.
    Qi G; Lee R; Hayward S
    Bioinformatics; 2005 Jun; 21(12):2832-8. PubMed ID: 15802286
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 6.