BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

184 related articles for article (PubMed ID: 20122242)

  • 41. SEAM: a Stochastic EM-type Algorithm for Motif-finding in biopolymer sequences.
    Bi C
    J Bioinform Comput Biol; 2007 Feb; 5(1):47-77. PubMed ID: 17477491
    [TBL] [Abstract][Full Text] [Related]  

  • 42. Alignment-free clustering of transcription factor binding motifs using a genetic-k-medoids approach.
    Broin PÓ; Smith TJ; Golden AA
    BMC Bioinformatics; 2015 Jan; 16():22. PubMed ID: 25627106
    [TBL] [Abstract][Full Text] [Related]  

  • 43. Greedy de novo motif discovery to construct motif repositories for bacterial proteomes.
    Khakzad H; Malmström J; Malmström L
    BMC Bioinformatics; 2019 Apr; 20(Suppl 4):141. PubMed ID: 30999854
    [TBL] [Abstract][Full Text] [Related]  

  • 44. Graphical approach to weak motif recognition.
    Yang X; Rajapakse JC
    Genome Inform; 2004; 15(2):52-62. PubMed ID: 15706491
    [TBL] [Abstract][Full Text] [Related]  

  • 45. Mining for class-specific motifs in protein sequence classification.
    Srinivasan SM; Vural S; King BR; Guda C
    BMC Bioinformatics; 2013 Mar; 14():96. PubMed ID: 23496846
    [TBL] [Abstract][Full Text] [Related]  

  • 46. Modeling within-motif dependence for transcription factor binding site predictions.
    Zhou Q; Liu JS
    Bioinformatics; 2004 Apr; 20(6):909-16. PubMed ID: 14751969
    [TBL] [Abstract][Full Text] [Related]  

  • 47. Fast model-based protein homology detection without alignment.
    Hochreiter S; Heusel M; Obermayer K
    Bioinformatics; 2007 Jul; 23(14):1728-36. PubMed ID: 17488755
    [TBL] [Abstract][Full Text] [Related]  

  • 48. A sequential method for discovering probabilistic motifs in proteins.
    Blekas K; Fotiadis DI; Likas A
    Methods Inf Med; 2004; 43(1):9-12. PubMed ID: 15026827
    [TBL] [Abstract][Full Text] [Related]  

  • 49. Fast and accurate discovery of degenerate linear motifs in protein sequences.
    Kelil A; Dubreuil B; Levy ED; Michnick SW
    PLoS One; 2014; 9(9):e106081. PubMed ID: 25207816
    [TBL] [Abstract][Full Text] [Related]  

  • 50. MUSA: a parameter free algorithm for the identification of biologically significant motifs.
    Mendes ND; Casimiro AC; Santos PM; Sá-Correia I; Oliveira AL; Freitas AT
    Bioinformatics; 2006 Dec; 22(24):2996-3002. PubMed ID: 17068086
    [TBL] [Abstract][Full Text] [Related]  

  • 51. An improved Gibbs sampling method for motif discovery via sequence weighting.
    Chen X; Jiang T
    Comput Syst Bioinformatics Conf; 2006; ():239-47. PubMed ID: 17369642
    [TBL] [Abstract][Full Text] [Related]  

  • 52. WebMOTIFS: automated discovery, filtering and scoring of DNA sequence motifs using multiple programs and Bayesian approaches.
    Romer KA; Kayombya GR; Fraenkel E
    Nucleic Acids Res; 2007 Jul; 35(Web Server issue):W217-20. PubMed ID: 17584794
    [TBL] [Abstract][Full Text] [Related]  

  • 53. EMS3: An Improved Algorithm for Finding Edit-Distance Based Motifs.
    Xiao P; Cai X; Rajasekaran S
    IEEE/ACM Trans Comput Biol Bioinform; 2021; 18(1):27-37. PubMed ID: 32931433
    [TBL] [Abstract][Full Text] [Related]  

  • 54. Efficient sequential and parallel algorithms for finding edit distance based motifs.
    Pal S; Xiao P; Rajasekaran S
    BMC Genomics; 2016 Aug; 17 Suppl 4(Suppl 4):465. PubMed ID: 27557423
    [TBL] [Abstract][Full Text] [Related]  

  • 55. Pr[m]: An Algorithm for Protein Motif Discovery.
    Semwal R; Aier I; Raj U; Varadwaj PK
    IEEE/ACM Trans Comput Biol Bioinform; 2022; 19(1):585-592. PubMed ID: 32750855
    [TBL] [Abstract][Full Text] [Related]  

  • 56. Scansite 2.0: Proteome-wide prediction of cell signaling interactions using short sequence motifs.
    Obenauer JC; Cantley LC; Yaffe MB
    Nucleic Acids Res; 2003 Jul; 31(13):3635-41. PubMed ID: 12824383
    [TBL] [Abstract][Full Text] [Related]  

  • 57. MODSIDE: a motif discovery pipeline and similarity detector.
    Tran NTL; Huang CH
    BMC Genomics; 2018 Oct; 19(1):755. PubMed ID: 30340511
    [TBL] [Abstract][Full Text] [Related]  

  • 58. Bioinformatics Approaches for Predicting Disordered Protein Motifs.
    Bhowmick P; Guharoy M; Tompa P
    Adv Exp Med Biol; 2015; 870():291-318. PubMed ID: 26387106
    [TBL] [Abstract][Full Text] [Related]  

  • 59. Protein motif extraction with neuro-fuzzy optimization.
    Chang BC; Halgamuge SK
    Bioinformatics; 2002 Aug; 18(8):1084-90. PubMed ID: 12176831
    [TBL] [Abstract][Full Text] [Related]  

  • 60. The XXmotif web server for eXhaustive, weight matriX-based motif discovery in nucleotide sequences.
    Luehr S; Hartmann H; Söding J
    Nucleic Acids Res; 2012 Jul; 40(Web Server issue):W104-9. PubMed ID: 22693218
    [TBL] [Abstract][Full Text] [Related]  

    [Previous]   [Next]    [New Search]
    of 10.